RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SLC25A2Q9BXI2 301 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 MAP1LC3BQ9GZQ8 125 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 SH3BGRL3Q9H299 93 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 RBM12B-AS1Q9P1G2 102 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TRBV19A0A075B6N1 114 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TRAV8-2A0A0B4J237 113 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 A0A0U1RQV1 116 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 RPL37AP8A6NKH3 93 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 HMSDA8MTL9 139 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 G3V3Q6 166 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 H3BMM0 161 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 SLC17A3O00476 420 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 SOCS3O14543 225 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 DUSP14O95147 198 aaKnown RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 PRSS2P07478 247 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 IGLC2P0DOY2 106 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 S100PP25815 95 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 GNG5P63218 68 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 UBE2L3P68036 154 aaKnown RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 PRR3P79522 188 aaKnown RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 SERF2P84101 59 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 PSG9Q00887 426 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 HIST1H1AQ02539 215 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 PMAIP1Q13794 54 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 ZFP69Q49AA0 526 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 AKR1C8PQ5T2L2 129 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 LCE1AQ5T7P2 110 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 GDF5OSQ5U4N7 250 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 MORN3Q6PF18 240 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 LCN15Q6UWW0 184 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 LINC00322Q6ZN03 302 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 FOXI2Q6ZQN5 318 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TMUB2Q71RG4 321 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TCTE3Q8IZS6 198 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 C1orf158Q8N1D5 194 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 EXOC3-AS1Q8N2X6 119 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 KCNRGQ8N5I3 272 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 STPG4Q8N801 248 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 RPUSD4Q96CM3 377 aaKnown RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 HYLS1Q96M11 299 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 LINC01587Q99440 93 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TM2D3Q9BRN9 247 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 SLC50A1Q9BRV3 221 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 ZNF471Q9BX82 626 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 MRPL32Q9BYC8 188 aaKnown RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 ZNF331Q9NQX6 463 aaPredicted RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 ZNF586Q9NXT0 402 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 TMEM14CQ9P0S9 112 aa1.98□□□□□ -2.09
SKP1-204ENST00000517691 YTHDF2Q9Y5A9 579 aaKnown RBP1.98□□□□□ -2.09
SKP1-204ENST00000517691 IGHV4-4A0A075B6R2 117 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 A0A0J9YX75 114 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 A0A0J9YXV3 536 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 PGPA6NDG6 321 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 PRAC2D3DTV9 90 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 BCL2L11O43521 198 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 C1QBP02746 253 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 ARL14EPLP0DKL9 152 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 TPT1P13693 172 aaKnown RBP1.97□□□□□ -2.09
SKP1-204ENST00000517691 HLA-DRB4P13762 266 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 CSN1S1P47710 185 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 EIF5AP63241 154 aaKnown RBP1.97□□□□□ -2.09
SKP1-204ENST00000517691 ERCC8Q13216 396 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 ZNF345Q14585 488 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 JOSD1Q15040 202 aaPredicted RBP1.97□□□□□ -2.09
SKP1-204ENST00000517691 ZNF506Q5JVG8 444 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 FAM74A1Q5RGS3 127 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 RPP25LQ8N5L8 163 aaKnown RBP1.97□□□□□ -2.09
SKP1-204ENST00000517691 OR8A1Q8NGG7 326 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 CMTM2Q8TAZ6 248 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 FAM213BQ8TBF2 198 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 FAM167A-AS1Q96KT0 104 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 DNAJC30Q96LL9 226 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 PSMG3Q9BT73 122 aaPredicted RBP1.97□□□□□ -2.09
SKP1-204ENST00000517691 C1QTNF4Q9BXJ3 329 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 SLC35B3Q9H1N7 401 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 CYTL1Q9NRR1 136 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 HLA-DRB4X5D2U9 266 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 PRKDCP78527 4128 aaKnown RBP1.97□□□□□ -2.09
SKP1-204ENST00000517691 COL7A1Q02388 2944 aa1.97□□□□□ -2.09
SKP1-204ENST00000517691 TRAV12-2A0A075B6T6 113 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 IGHV1OR15-1A0A075B7D0 117 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 A0A0J9YWU9 116 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 A0A1B0GV50 99 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 PLAC8L1A1L4L8 177 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 M0R2Z0 102 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 M0R3E3 92 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 DEFB4AO15263 64 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 CXorf1O96002 111 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 PRSS1P07477 247 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 FGF6P10767 208 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 HTN1P15515 57 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 GCHFRP30047 84 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 EMP1P54849 157 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 PDE6HQ13956 83 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 PMVKQ15126 192 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 SPINK13Q1W4C9 94 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 LGALSLQ3ZCW2 172 aaPredicted RBP1.96□□□□□ -2.09
SKP1-204ENST00000517691 FAM162BQ5T6X4 162 aa1.96□□□□□ -2.09
SKP1-204ENST00000517691 EIF5AL1Q6IS14 154 aaKnown RBP1.96□□□□□ -2.09
SKP1-204ENST00000517691 TEX43Q6ZNM6 134 aa1.96□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 295.3 ms