RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 LOC100130705A0A1B0GUX0 176 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 LOC101927531A0A1B0GV80 90 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 A0A1W2PPM0 123 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 IFNA17P01571 189 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 AKAIN1P0CW23 69 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 HIST1H1DP16402 221 aaKnown RBP0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 CBLN1P23435 193 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 S100PP25815 95 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 CAV3P56539 151 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 KRTAP10-4P60372 401 aaPredicted RBP0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 MRPS10P82664 201 aaKnown RBP0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 FXYD3Q14802 87 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 IQCJQ1A5X6 159 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 Q6AWC8 147 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 KRTAP5-7Q6L8G8 165 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 Q6ZS92 163 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 C4orf33Q8N1A6 199 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 C5orf56Q8N8D9 126 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 TSKUQ8WUA8 353 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 IFI27L1Q96BM0 104 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 CCL19Q99731 98 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 SEC11CQ9BY50 192 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 SCN3BQ9NY72 215 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 IER3IP1Q9Y5U9 82 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 SERP1Q9Y6X1 66 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 CNTRLQ7Z7A1 2325 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 AFDNP55196 1824 aaKnown RBP0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 ABCA4P78363 2273 aa0.43□□□□□ -2.34
RN7SKP88-201ENST00000516847 A2ML1A8K2U0 1454 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 IFT140Q96RY7 1462 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 CDK12Q9NYV4 1490 aaPredicted RBP0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 PLXNA1Q9UIW2 1896 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 TRAV12-3A0A0B4J271 114 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 TRBV30A0A0K0K1B3 111 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 A6NIN4 97 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 MCRIP1C9JLW8 97 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 F6UZH7 168 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 APOC4-APOC2K7ER74 178 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 SNCGO76070 127 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 APOC2P02655 101 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 S100A1P23297 94 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 GNG4P50150 75 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 UBE2G1P62253 170 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 CCL8P80075 99 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 KLKP1Q107X0 134 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 ZNF56Q15929 161 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 ZNF818PQ6ZRF7 136 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 LINC00208Q96KT6 92 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 RPRMQ9NS64 109 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 COA4Q9NYJ1 87 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 BET1LQ9NYM9 111 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 GNG8Q9UK08 70 aa0.42□□□□□ -2.34
RN7SKP88-201ENST00000516847 ESPL1Q14674 2120 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 BCORL1Q5H9F3 1711 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 HELZ2Q9BYK8 2649 aaKnown RBP0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 ROS1P08922 2347 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 RREB1Q92766 1687 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 QRICH2Q9H0J4 1663 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 A0A096LNT2 108 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 TRBV10-3A0A0K0K1G6 114 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 TCRBV3S1A0A5B6 114 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 RBAKDNA6NC62 111 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 K7EIL1 84 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 KRTAP5-8O75690 187 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 CCL3L1P16619 93 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 UBE2D1P51668 147 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 TPPP2P59282 170 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 NPC2P61916 151 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 SSBP1Q04837 148 aaKnown RBP0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 SPINK13Q1W4C9 94 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 RPL7L1Q6DKI1 246 aaKnown RBP0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 CYP2G1PQ6ZSU1 146 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 C8orf59Q8N0T1 100 aaPredicted RBP0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 Q8N6K4 173 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 Q8N8P6 123 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 LSM10Q969L4 123 aaKnown RBP0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 PPP3R2Q96LZ3 170 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 TMEM14BQ9NUH8 114 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 MAPKBP1O60336 1514 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 MUC22E2RYF6 1773 aaPredicted RBP0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 KTN1Q86UP2 1357 aaKnown RBP0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 MYOM2P54296 1465 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 LAMA4Q16363 1823 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 PARP14Q460N5 1801 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 PHIPQ8WWQ0 1821 aa0.41□□□□□ -2.34
RN7SKP88-201ENST00000516847 KMT2BQ9UMN6 2715 aaPredicted RBP0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 TRBV7-1A0A0A6YYK4 115 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 SPAARA0A1B0GVQ0 90 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 C20orf202A1L168 122 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 SIX6O95475 246 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 PRB4P10163 310 aaPredicted RBP0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 FXYD6P3P58550 94 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 ELOF1P60002 83 aaKnown RBP0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 PPP3R1P63098 170 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 KRTAP5-2Q701N4 177 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 COX7B2Q8TF08 81 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 PLAC4Q8WY50 150 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 TCEAL7Q9BRU2 100 aa0.4□□□□□ -2.35
RN7SKP88-201ENST00000516847 NRXN2Q9P2S2 1712 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms