RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 RBMY1A1P0DJD3 496 aaKnown RBP11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 RBMY1CP0DJD4 496 aa11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 ODF3L2Q3SX64 289 aa11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 AP1S3Q96PC3 154 aa11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 LINC01546A6NGU7 62 aa11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 CCL25O15444 150 aa11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
THUMPD3-210ENST00000515662 NSD1Q96L73 2696 aaPredicted RBP11.37□□□□□ -0.59
THUMPD3-210ENST00000515662 HIVEP1P15822 2718 aa11.37□□□□□ -0.59
THUMPD3-210ENST00000515662 NXT2Q9NPJ8 142 aaKnown RBP11.37□□□□□ -0.59
THUMPD3-210ENST00000515662 SAP30O75446 220 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 NDUFA11Q86Y39 141 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 DEFB125Q8N687 156 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 MUC4Q99102 2169 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 TCTAP57738 103 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 ZNF747Q9BV97 191 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 KIF25-AS1Q9Y6Z4 181 aa11.36□□□□□ -0.59
THUMPD3-210ENST00000515662 IGLV2-18A0A075B6J9 118 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 Q8N8P6 123 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 CLUHP3Q96NS8 147 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 C20orf202A1L168 122 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 CRLF1O75462 422 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 COX11Q9Y6N1 276 aa11.35□□□□□ -0.59
THUMPD3-210ENST00000515662 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 HBDP02042 147 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 MGPP08493 103 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 CBY3A6NI87 242 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 IGLV1-51P01701 117 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 PTTG1IPP53801 180 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 LINC00315P59091 139 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 RASL10AQ92737 203 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 JPT2Q9H910 190 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 ST20Q9HBF5 79 aa11.34□□□□□ -0.59
THUMPD3-210ENST00000515662 OR11H12B2RN74 326 aa11.33□□□□□ -0.6
THUMPD3-210ENST00000515662 NUDT3O95989 172 aa11.33□□□□□ -0.6
THUMPD3-210ENST00000515662 PET117Q6UWS5 81 aa11.33□□□□□ -0.6
THUMPD3-210ENST00000515662 WNK1Q9H4A3 2382 aa11.33□□□□□ -0.6
THUMPD3-210ENST00000515662 SMIM17P0DL12 118 aa11.33□□□□□ -0.6
THUMPD3-210ENST00000515662 SYT8Q8NBV8 401 aa11.33□□□□□ -0.6
THUMPD3-210ENST00000515662 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.6
THUMPD3-210ENST00000515662 FN1P02751 2386 aaKnown RBP11.32□□□□□ -0.6
THUMPD3-210ENST00000515662 NIPBLQ6KC79 2804 aaeCLIP11.32□□□□□ -0.6
THUMPD3-210ENST00000515662 SLC25A34Q6PIV7 304 aa11.32□□□□□ -0.6
THUMPD3-210ENST00000515662 STHQ8IWL8 128 aa11.32□□□□□ -0.6
THUMPD3-210ENST00000515662 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
THUMPD3-210ENST00000515662 FCER1GP30273 86 aa11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 A0A087WWL8 130 aa11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 HSBP1L1C9JCN9 74 aa11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 HTN1P15515 57 aa11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
THUMPD3-210ENST00000515662 INSP01308 110 aa11.3□□□□□ -0.6
THUMPD3-210ENST00000515662 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
THUMPD3-210ENST00000515662 BVES-AS1Q5T3Y7 98 aa11.3□□□□□ -0.6
THUMPD3-210ENST00000515662 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
THUMPD3-210ENST00000515662 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
THUMPD3-210ENST00000515662 LINC00467Q9BRT7 94 aa11.3□□□□□ -0.6
THUMPD3-210ENST00000515662 PPP1R17O96001 155 aa11.29□□□□□ -0.6
THUMPD3-210ENST00000515662 PRM2P04554 102 aa11.29□□□□□ -0.6
THUMPD3-210ENST00000515662 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
THUMPD3-210ENST00000515662 LAGE3Q14657 143 aa11.29□□□□□ -0.6
THUMPD3-210ENST00000515662 BEAN1Q3B7T3 259 aa11.29□□□□□ -0.6
THUMPD3-210ENST00000515662 LINC00482Q8N8I6 264 aa11.29□□□□□ -0.6
THUMPD3-210ENST00000515662 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
THUMPD3-210ENST00000515662 PF4P02776 101 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 LINC01587Q99440 93 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 CRYGDP07320 174 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
THUMPD3-210ENST00000515662 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.6
THUMPD3-210ENST00000515662 F5H697 171 aa11.27□□□□□ -0.61
THUMPD3-210ENST00000515662 VAMP3Q15836 100 aa11.27□□□□□ -0.61
THUMPD3-210ENST00000515662 ANKRD39Q53RE8 183 aa11.27□□□□□ -0.61
THUMPD3-210ENST00000515662 C19orf73Q9NVV2 129 aa11.27□□□□□ -0.61
THUMPD3-210ENST00000515662 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
THUMPD3-210ENST00000515662 C2orf91Q6ZV80 131 aa11.26□□□□□ -0.61
THUMPD3-210ENST00000515662 C2CD3Q4AC94 2353 aa11.26□□□□□ -0.61
THUMPD3-210ENST00000515662 ZNF415Q09FC8 603 aa11.26□□□□□ -0.61
THUMPD3-210ENST00000515662 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.26□□□□□ -0.61
THUMPD3-210ENST00000515662 C18orf15Q96N68 181 aa11.26□□□□□ -0.61
THUMPD3-210ENST00000515662 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
THUMPD3-210ENST00000515662 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
THUMPD3-210ENST00000515662 CSTL1Q9H114 145 aa11.25□□□□□ -0.61
THUMPD3-210ENST00000515662 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
THUMPD3-210ENST00000515662 K7EMI3 77 aa11.24□□□□□ -0.61
THUMPD3-210ENST00000515662 M0R2P5 195 aa11.24□□□□□ -0.61
THUMPD3-210ENST00000515662 RPL32P62910 135 aaKnown RBP11.24□□□□□ -0.61
THUMPD3-210ENST00000515662 PTH2Q96A98 100 aa11.24□□□□□ -0.61
THUMPD3-210ENST00000515662 ZNF56Q15929 161 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms