RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 MRPL53Q96EL3 112 aaKnown RBP9.69□□□□□ -0.86
PHF3-212ENST00000515594 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
PHF3-212ENST00000515594 FAM208BQ5VWN6 2430 aa9.68□□□□□ -0.86
PHF3-212ENST00000515594 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
PHF3-212ENST00000515594 PSMB2P49721 201 aa9.68□□□□□ -0.86
PHF3-212ENST00000515594 NF1P21359 2839 aa9.68□□□□□ -0.86
PHF3-212ENST00000515594 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
PHF3-212ENST00000515594 F8W1H4 67 aa9.68□□□□□ -0.86
PHF3-212ENST00000515594 IGHV4-61A0A0C4DH41 118 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 IGHV4-39P01824 125 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 CD7P09564 240 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 SUMO4Q6EEV6 95 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 ZNF580Q9UK33 172 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 WNK1Q9H4A3 2382 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 LINC00315P59091 139 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 CLEC2AQ6UVW9 174 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 NFE4Q86UQ8 179 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 TSPAN13O95857 204 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 COX6B1P14854 86 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 C19orf54Q5BKX5 351 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
PHF3-212ENST00000515594 PRM2P04554 102 aa9.66□□□□□ -0.86
PHF3-212ENST00000515594 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
PHF3-212ENST00000515594 FHL3Q13643 280 aa9.66□□□□□ -0.86
PHF3-212ENST00000515594 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
PHF3-212ENST00000515594 MDFICQ9P1T7 246 aa9.66□□□□□ -0.86
PHF3-212ENST00000515594 ABCA12Q86UK0 2595 aa9.66□□□□□ -0.86
PHF3-212ENST00000515594 TAL2Q16559 108 aa9.66□□□□□ -0.86
PHF3-212ENST00000515594 ACACBO00763 2458 aa9.65□□□□□ -0.86
PHF3-212ENST00000515594 H7C2G1 150 aa9.65□□□□□ -0.86
PHF3-212ENST00000515594 ANKRD17O75179 2603 aaKnown RBP9.65□□□□□ -0.86
PHF3-212ENST00000515594 TEX15Q9BXT5 2789 aa9.65□□□□□ -0.86
PHF3-212ENST00000515594 HTN1P15515 57 aa9.65□□□□□ -0.86
PHF3-212ENST00000515594 DUX5Q96PT3 197 aa9.65□□□□□ -0.86
PHF3-212ENST00000515594 KIF25-AS1Q9Y6Z4 181 aa9.65□□□□□ -0.86
PHF3-212ENST00000515594 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
PHF3-212ENST00000515594 IGHV1-69DA0A0B4J2H0 117 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 IGHV1-69P01742 117 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 SDHAF1A6NFY7 115 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 FAM223BA6NKX1 122 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 NDUFA4O00483 81 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 OVOL1O14753 267 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 HIST2H2BDQ6DRA6 164 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 FAM223AQ8IWN6 122 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 IGHV3-73A0A0B4J1V6 119 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 NDUFS8O00217 210 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 KLK9Q2XQG4 91 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 FAM159AQ6UWV7 190 aa9.64□□□□□ -0.87
PHF3-212ENST00000515594 A0A0J9YY99 117 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 IGIPA6NJ69 53 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 PSMG4Q5JS54 123 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 SYT8Q8NBV8 401 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 SONP18583 2426 aaKnown RBP9.63□□□□□ -0.87
PHF3-212ENST00000515594 PTPN13Q12923 2485 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 EPG5Q9HCE0 2579 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 RAX2Q96IS3 184 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 FAM19A4Q96LR4 140 aa9.63□□□□□ -0.87
PHF3-212ENST00000515594 RNASE13Q5GAN3 156 aaKnown RBP9.62□□□□□ -0.87
PHF3-212ENST00000515594 NRGNQ92686 78 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 IGSF10Q6WRI0 2623 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 AVPP01185 164 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 ZNF56Q15929 161 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 CFAP126Q5VTH2 177 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 LENEPQ9Y5L5 61 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 LRRK2Q5S007 2527 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 UBE2D1P51668 147 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 SPINK13Q1W4C9 94 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
PHF3-212ENST00000515594 ZNF469Q96JG9 3925 aaPredicted RBP9.61□□□□□ -0.87
PHF3-212ENST00000515594 JMJD1CQ15652 2540 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 TCL1BO95988 128 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 P0DMU3 169 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 FAM231AP0DMU4 169 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 FAM231CP0DMU5 169 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 Q9UF83 564 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 PRRC2AP48634 2157 aaKnown RBP9.61□□□□□ -0.87
PHF3-212ENST00000515594 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 CFC1P0CG37 223 aa9.61□□□□□ -0.87
PHF3-212ENST00000515594 POLR2KP53803 58 aaKnown RBP9.61□□□□□ -0.87
PHF3-212ENST00000515594 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
PHF3-212ENST00000515594 GNLYP22749 145 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 FOXI1Q12951 378 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 CEMP1Q6PRD7 247 aaPredicted RBP9.6□□□□□ -0.87
PHF3-212ENST00000515594 NDUFA11Q86Y39 141 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
PHF3-212ENST00000515594 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
PHF3-212ENST00000515594 CRIP2P52943 208 aaPredicted RBP9.6□□□□□ -0.87
PHF3-212ENST00000515594 PROK1P58294 105 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 PMVKQ15126 192 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 Q5PR19 223 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 Q8N1Y9 231 aa9.6□□□□□ -0.87
PHF3-212ENST00000515594 SPATA25Q9BR10 227 aa9.59□□□□□ -0.87
PHF3-212ENST00000515594 PIEZO1Q92508 2521 aa9.59□□□□□ -0.87
PHF3-212ENST00000515594 IGHV4-30-2A0A087WSY4 118 aa9.59□□□□□ -0.87
PHF3-212ENST00000515594 J3QR89 54 aa9.59□□□□□ -0.87
PHF3-212ENST00000515594 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms