RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 SS18Q15532 418 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 KRTAP13-3Q3SY46 172 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 TMEM97Q5BJF2 176 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 OR10G8Q8NGN5 311 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 TVP23CQ96ET8 276 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 SLC25A2Q9BXI2 301 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 SLIRPQ9GZT3 109 aaKnown RBP7.53□□□□□ -1.2
SMAD1-216ENST00000515527 MTFP1Q9UDX5 166 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 SSSCA1O60232 199 aa7.52□□□□□ -1.21
SMAD1-216ENST00000515527 FGF6P10767 208 aa7.52□□□□□ -1.21
SMAD1-216ENST00000515527 TMEM14EPQ6UXP3 125 aa7.52□□□□□ -1.21
SMAD1-216ENST00000515527 NEXN-AS1Q8NBZ9 246 aa7.52□□□□□ -1.21
SMAD1-216ENST00000515527 MITD1Q8WV92 249 aa7.52□□□□□ -1.21
SMAD1-216ENST00000515527 HYLS1Q96M11 299 aa7.52□□□□□ -1.21
SMAD1-216ENST00000515527 DERL1Q9BUN8 251 aa7.52□□□□□ -1.21
SMAD1-216ENST00000515527 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
SMAD1-216ENST00000515527 SYCNQ0VAF6 134 aa7.51□□□□□ -1.21
SMAD1-216ENST00000515527 FAM210AQ96ND0 272 aa7.51□□□□□ -1.21
SMAD1-216ENST00000515527 APOA1P02647 267 aa7.5□□□□□ -1.21
SMAD1-216ENST00000515527 BCL2P10415 239 aa7.5□□□□□ -1.21
SMAD1-216ENST00000515527 ZNF80P51504 273 aaPredicted RBP7.5□□□□□ -1.21
SMAD1-216ENST00000515527 ARL16Q0P5N6 197 aa7.5□□□□□ -1.21
SMAD1-216ENST00000515527 ZFP69Q49AA0 526 aa7.5□□□□□ -1.21
SMAD1-216ENST00000515527 GGACTQ9BVM4 153 aa7.5□□□□□ -1.21
SMAD1-216ENST00000515527 TSC22D2O75157 780 aa7.49□□□□□ -1.21
SMAD1-216ENST00000515527 SMIM8Q96KF7 97 aa7.49□□□□□ -1.21
SMAD1-216ENST00000515527 AQP10Q96PS8 301 aa7.49□□□□□ -1.21
SMAD1-216ENST00000515527 FLGP20930 4061 aaPredicted RBP7.48□□□□□ -1.21
SMAD1-216ENST00000515527 IGHV1-24A0A0C4DH33 117 aa7.48□□□□□ -1.21
SMAD1-216ENST00000515527 RPL18AQ02543 176 aaKnown RBP7.48□□□□□ -1.21
SMAD1-216ENST00000515527 GOLT1AQ6ZVE7 132 aa7.48□□□□□ -1.21
SMAD1-216ENST00000515527 FXYD5Q96DB9 178 aa7.48□□□□□ -1.21
SMAD1-216ENST00000515527 FAM167A-AS1Q96KT0 104 aa7.48□□□□□ -1.21
SMAD1-216ENST00000515527 NDFIP1Q9BT67 221 aa7.48□□□□□ -1.21
SMAD1-216ENST00000515527 VCXQ9H320 206 aa7.48□□□□□ -1.21
SMAD1-216ENST00000515527 OR5AC2Q9NZP5 309 aa7.48□□□□□ -1.21
SMAD1-216ENST00000515527 TRBV6-1A0A0K0K1D8 114 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 A0A1B0GUV1 79 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 LCE2BO14633 110 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 GCGP01275 180 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 RPL29P47914 159 aaKnown RBP7.47□□□□□ -1.21
SMAD1-216ENST00000515527 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 OR11H4Q8NGC9 324 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 CMTM2Q8TAZ6 248 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
SMAD1-216ENST00000515527 SFRP2Q96HF1 295 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 SCGB3A2Q96PL1 93 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 PRRT1Q99946 306 aa7.47□□□□□ -1.21
SMAD1-216ENST00000515527 H3BVH4 76 aa7.46□□□□□ -1.22
SMAD1-216ENST00000515527 TGFBR1P36897 503 aa7.46□□□□□ -1.22
SMAD1-216ENST00000515527 UBE2BP63146 152 aa7.46□□□□□ -1.22
SMAD1-216ENST00000515527 ID3Q02535 119 aa7.46□□□□□ -1.22
SMAD1-216ENST00000515527 GCSAMLQ5JQS6 135 aa7.46□□□□□ -1.22
SMAD1-216ENST00000515527 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
SMAD1-216ENST00000515527 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
SMAD1-216ENST00000515527 BLOC1S6Q9UL45 172 aa7.46□□□□□ -1.22
SMAD1-216ENST00000515527 A0A1B0GVG6 124 aa7.45□□□□□ -1.22
SMAD1-216ENST00000515527 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
SMAD1-216ENST00000515527 ZNF861PO60384 105 aa7.45□□□□□ -1.22
SMAD1-216ENST00000515527 CFC1P0CG37 223 aa7.45□□□□□ -1.22
SMAD1-216ENST00000515527 RPS19P39019 145 aaKnown RBP7.45□□□□□ -1.22
SMAD1-216ENST00000515527 SDHCQ99643 169 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-216ENST00000515527 LYRM2Q9NU23 88 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-216ENST00000515527 IL36BQ9NZH7 164 aa7.45□□□□□ -1.22
SMAD1-216ENST00000515527 FAM25AB3EWG3 89 aa7.44□□□□□ -1.22
SMAD1-216ENST00000515527 FAM25CB3EWG5 89 aa7.44□□□□□ -1.22
SMAD1-216ENST00000515527 FAM25GB3EWG6 89 aa7.44□□□□□ -1.22
SMAD1-216ENST00000515527 HPGDSO60760 199 aa7.44□□□□□ -1.22
SMAD1-216ENST00000515527 GABARAPL2P60520 117 aa7.44□□□□□ -1.22
SMAD1-216ENST00000515527 ZNF56Q15929 161 aa7.44□□□□□ -1.22
SMAD1-216ENST00000515527 SGK494Q96LW2 274 aa7.44□□□□□ -1.22
SMAD1-216ENST00000515527 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
SMAD1-216ENST00000515527 OR7C2O60412 319 aa7.43□□□□□ -1.22
SMAD1-216ENST00000515527 BAXQ07812 192 aa7.43□□□□□ -1.22
SMAD1-216ENST00000515527 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
SMAD1-216ENST00000515527 CLVS1Q8IUQ0 354 aaPredicted RBP7.43□□□□□ -1.22
SMAD1-216ENST00000515527 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
SMAD1-216ENST00000515527 ANAPC11Q9NYG5 84 aa7.43□□□□□ -1.22
SMAD1-216ENST00000515527 M0R381 172 aa7.42□□□□□ -1.22
SMAD1-216ENST00000515527 APOMO95445 188 aa7.42□□□□□ -1.22
SMAD1-216ENST00000515527 MBPP02686 304 aaPredicted RBP7.42□□□□□ -1.22
SMAD1-216ENST00000515527 AKAIN1P0CW23 69 aa7.42□□□□□ -1.22
SMAD1-216ENST00000515527 CAMPP49913 170 aa7.42□□□□□ -1.22
SMAD1-216ENST00000515527 RAB4BP61018 213 aa7.42□□□□□ -1.22
SMAD1-216ENST00000515527 TMEM243Q9BU79 118 aa7.42□□□□□ -1.22
SMAD1-216ENST00000515527 WDR83OSQ9Y284 106 aa7.42□□□□□ -1.22
SMAD1-216ENST00000515527 IGKV3D-20A0A0C4DH25 116 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 FAM168BA1KXE4 195 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 ARMS2P0C7Q2 107 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 UBE2L3P68036 154 aaKnown RBP7.41□□□□□ -1.22
SMAD1-216ENST00000515527 CTAG1AP78358 180 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 FOXI1Q12951 378 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 CTF1Q16619 201 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 SPANXN2Q5MJ10 180 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 FAM19A5Q7Z5A7 132 aaPredicted RBP7.41□□□□□ -1.22
SMAD1-216ENST00000515527 UQCC1Q9NVA1 299 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 SCP2D1Q9UJQ7 156 aa7.41□□□□□ -1.22
SMAD1-216ENST00000515527 UBE2L5PA0A1B0GUS4 154 aa7.4□□□□□ -1.22
SMAD1-216ENST00000515527 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms