RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 COX6B1P14854 86 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 C10orf99Q6UWK7 81 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 HIST1H4GQ99525 98 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 KIR2DL4Q99706 377 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 PRADC1Q9BSG0 188 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 IGSF10Q6WRI0 2623 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 ELANEP08246 267 aa13.01□□□□□ -0.33
SNX2-213ENST00000514949 LGALS1P09382 135 aaKnown RBP13.01□□□□□ -0.33
SNX2-213ENST00000514949 IGLV4-69A0A075B6H9 119 aa13□□□□□ -0.33
SNX2-213ENST00000514949 SYT8Q8NBV8 401 aa13□□□□□ -0.33
SNX2-213ENST00000514949 VPS25Q9BRG1 176 aa13□□□□□ -0.33
SNX2-213ENST00000514949 TP53TG1Q9Y2A0 90 aa13□□□□□ -0.33
SNX2-213ENST00000514949 SDHAF1A6NFY7 115 aa13□□□□□ -0.33
SNX2-213ENST00000514949 FSHBP01225 129 aa13□□□□□ -0.33
SNX2-213ENST00000514949 PMVKQ15126 192 aa13□□□□□ -0.33
SNX2-213ENST00000514949 A0A087WWL8 130 aa12.99□□□□□ -0.33
SNX2-213ENST00000514949 G3V4G9 280 aa12.99□□□□□ -0.33
SNX2-213ENST00000514949 SAP30O75446 220 aa12.99□□□□□ -0.33
SNX2-213ENST00000514949 VPREB3Q9UKI3 123 aa12.99□□□□□ -0.33
SNX2-213ENST00000514949 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 M0QY20 66 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 Q8N1Y9 231 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 WFDC12Q8WWY7 111 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 NRGNQ92686 78 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 UBE2E2Q96LR5 201 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 MDFICQ9P1T7 246 aa12.98□□□□□ -0.33
SNX2-213ENST00000514949 F5H697 171 aa12.97□□□□□ -0.33
SNX2-213ENST00000514949 ZNF256Q9Y2P7 627 aaPredicted RBP12.97□□□□□ -0.33
SNX2-213ENST00000514949 C11orf86A6NJI1 115 aa12.97□□□□□ -0.33
SNX2-213ENST00000514949 SYNJ2BPP57105 145 aa12.97□□□□□ -0.33
SNX2-213ENST00000514949 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
SNX2-213ENST00000514949 AMTNQ6UX39 209 aa12.97□□□□□ -0.33
SNX2-213ENST00000514949 Q6YL49 198 aa12.97□□□□□ -0.33
SNX2-213ENST00000514949 ZNF479Q96JC4 524 aa12.97□□□□□ -0.33
SNX2-213ENST00000514949 RHOHQ15669 191 aa12.96□□□□□ -0.33
SNX2-213ENST00000514949 RRN3P1Q2M238 152 aa12.96□□□□□ -0.33
SNX2-213ENST00000514949 NSUN5P1Q3KNT7 163 aa12.96□□□□□ -0.33
SNX2-213ENST00000514949 ZNF702PQ9H963 129 aa12.96□□□□□ -0.33
SNX2-213ENST00000514949 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
SNX2-213ENST00000514949 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
SNX2-213ENST00000514949 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
SNX2-213ENST00000514949 TGFAP01135 160 aa12.95□□□□□ -0.34
SNX2-213ENST00000514949 ZNF876PQ49A33 203 aa12.95□□□□□ -0.34
SNX2-213ENST00000514949 HERVK_113P61574 105 aa12.95□□□□□ -0.34
SNX2-213ENST00000514949 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
SNX2-213ENST00000514949 RPL39P62891 51 aaKnown RBP12.94□□□□□ -0.34
SNX2-213ENST00000514949 TRPT1Q86TN4 253 aaKnown RBP12.94□□□□□ -0.34
SNX2-213ENST00000514949 EDA2RQ9HAV5 297 aa12.94□□□□□ -0.34
SNX2-213ENST00000514949 USP9YO00507 2555 aaPredicted RBP12.94□□□□□ -0.34
SNX2-213ENST00000514949 A8MTW9 85 aa12.94□□□□□ -0.34
SNX2-213ENST00000514949 F8W1H4 67 aa12.94□□□□□ -0.34
SNX2-213ENST00000514949 C21orf62-AS1Q17RA5 79 aa12.94□□□□□ -0.34
SNX2-213ENST00000514949 SPINK13Q1W4C9 94 aa12.94□□□□□ -0.34
SNX2-213ENST00000514949 TRGV11A0A075B6L2 103 aa12.93□□□□□ -0.34
SNX2-213ENST00000514949 IGKV3-20P01619 116 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 NFE4Q86UQ8 179 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 MYO18BQ8IUG5 2567 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 TMEM238LA0A1B0GVL6 79 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 A6NJY4 79 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 UBE2D1P51668 147 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 SCGB2A2Q13296 93 aa12.92□□□□□ -0.34
SNX2-213ENST00000514949 CD300EQ496F6 205 aaPredicted RBP12.92□□□□□ -0.34
SNX2-213ENST00000514949 HOXA3O43365 443 aaPredicted RBP12.91□□□□□ -0.34
SNX2-213ENST00000514949 ZNF56Q15929 161 aa12.91□□□□□ -0.34
SNX2-213ENST00000514949 ANKRD17O75179 2603 aaKnown RBP12.91□□□□□ -0.34
SNX2-213ENST00000514949 Q8N2B8 174 aa12.91□□□□□ -0.34
SNX2-213ENST00000514949 ZNRF2Q8NHG8 242 aa12.91□□□□□ -0.34
SNX2-213ENST00000514949 PLEKHB2Q96CS7 222 aa12.91□□□□□ -0.34
SNX2-213ENST00000514949 SPANXB1Q9NS25 103 aaPredicted RBP12.91□□□□□ -0.34
SNX2-213ENST00000514949 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
SNX2-213ENST00000514949 A0A0J9YY99 117 aa12.9□□□□□ -0.34
SNX2-213ENST00000514949 P0DMU3 169 aa12.9□□□□□ -0.34
SNX2-213ENST00000514949 FAM231AP0DMU4 169 aa12.9□□□□□ -0.34
SNX2-213ENST00000514949 FAM231CP0DMU5 169 aa12.9□□□□□ -0.34
SNX2-213ENST00000514949 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
SNX2-213ENST00000514949 DOPEY2Q9Y3R5 2298 aa12.9□□□□□ -0.35
SNX2-213ENST00000514949 ZANQ9Y493 2812 aa12.9□□□□□ -0.35
SNX2-213ENST00000514949 C20orf203Q8NBC4 194 aa12.89□□□□□ -0.35
SNX2-213ENST00000514949 KLHL30-AS1Q8NEE0 82 aa12.89□□□□□ -0.35
SNX2-213ENST00000514949 UTP20O75691 2785 aaKnown RBP12.89□□□□□ -0.35
SNX2-213ENST00000514949 ACACBO00763 2458 aa12.89□□□□□ -0.35
SNX2-213ENST00000514949 I3L3M4 83 aa12.89□□□□□ -0.35
SNX2-213ENST00000514949 IGHV4-31P0DP07 118 aa12.89□□□□□ -0.35
SNX2-213ENST00000514949 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
SNX2-213ENST00000514949 FBN2P35556 2912 aa12.88□□□□□ -0.35
SNX2-213ENST00000514949 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
SNX2-213ENST00000514949 AMELXQ99217 191 aa12.88□□□□□ -0.35
SNX2-213ENST00000514949 Q5PR19 223 aa12.88□□□□□ -0.35
SNX2-213ENST00000514949 DUX5Q96PT3 197 aa12.88□□□□□ -0.35
SNX2-213ENST00000514949 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
SNX2-213ENST00000514949 MXRA5Q9NR99 2828 aa12.87□□□□□ -0.35
SNX2-213ENST00000514949 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNX2-213ENST00000514949 SLC25A29Q8N8R3 303 aa12.87□□□□□ -0.35
SNX2-213ENST00000514949 MAPK1IP1LQ8NDC0 245 aa12.87□□□□□ -0.35
SNX2-213ENST00000514949 SORL1Q92673 2214 aa12.87□□□□□ -0.35
SNX2-213ENST00000514949 PRRC2AP48634 2157 aaKnown RBP12.87□□□□□ -0.35
SNX2-213ENST00000514949 CSMD2Q7Z408 3487 aa12.87□□□□□ -0.35
SNX2-213ENST00000514949 RBMY1A1P0DJD3 496 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms