RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 NDUFAF3Q9BU61 184 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 SMIM2Q9BVW6 85 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 JPT2Q9H910 190 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 INSP01308 110 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
VCAN-211ENST00000513984 SPATA45Q537H7 98 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
VCAN-211ENST00000513984 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
VCAN-211ENST00000513984 DEFA6Q01524 100 aa10.94□□□□□ -0.66
VCAN-211ENST00000513984 RPL39LQ96EH5 51 aaKnown RBP10.94□□□□□ -0.66
VCAN-211ENST00000513984 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 LAGE3Q14657 143 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 BEAN1Q3B7T3 259 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 A0A087WWL8 130 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 PF4P02776 101 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 ZNF705AQ6ZN79 300 aaPredicted RBP10.93□□□□□ -0.66
VCAN-211ENST00000513984 LINC00482Q8N8I6 264 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 IFI27L1Q96BM0 104 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
VCAN-211ENST00000513984 K7EMI3 77 aa10.92□□□□□ -0.66
VCAN-211ENST00000513984 CRYGDP07320 174 aa10.92□□□□□ -0.66
VCAN-211ENST00000513984 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
VCAN-211ENST00000513984 MAJINQ3KP22 176 aa10.92□□□□□ -0.66
VCAN-211ENST00000513984 ZNF876PQ49A33 203 aa10.92□□□□□ -0.66
VCAN-211ENST00000513984 TMEM158Q8WZ71 300 aa10.92□□□□□ -0.66
VCAN-211ENST00000513984 MIEN1Q9BRT3 115 aa10.92□□□□□ -0.66
VCAN-211ENST00000513984 H0Y8G0 127 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 PIK3CD-AS1Q5SR53 167 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 C19orf73Q9NVV2 129 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 TCAPO15273 167 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 HTN1P15515 57 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 LGALS9CQ6DKI2 356 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 PTH2Q96A98 100 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 LINC01587Q99440 93 aa10.91□□□□□ -0.66
VCAN-211ENST00000513984 NUTF2P61970 127 aaKnown RBP10.9□□□□□ -0.66
VCAN-211ENST00000513984 ORMDL2Q53FV1 153 aa10.9□□□□□ -0.66
VCAN-211ENST00000513984 FAM74A4Q5TZK3 123 aa10.9□□□□□ -0.66
VCAN-211ENST00000513984 C11orf72Q8NBR9 251 aa10.9□□□□□ -0.66
VCAN-211ENST00000513984 MCRIP2Q9BUT9 160 aaKnown RBP10.9□□□□□ -0.66
VCAN-211ENST00000513984 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
VCAN-211ENST00000513984 F5H697 171 aa10.89□□□□□ -0.67
VCAN-211ENST00000513984 M0R2P5 195 aa10.89□□□□□ -0.67
VCAN-211ENST00000513984 IGLC3P0DOY3 106 aa10.89□□□□□ -0.67
VCAN-211ENST00000513984 IGLL1P15814 213 aa10.89□□□□□ -0.67
VCAN-211ENST00000513984 TRBV6-5A0A0K0K1A5 114 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 ST20Q9HBF5 79 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 PRM2P04554 102 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 POLR2KP53803 58 aaKnown RBP10.88□□□□□ -0.67
VCAN-211ENST00000513984 ZNF56Q15929 161 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 C1orf158Q8N1D5 194 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.88□□□□□ -0.67
VCAN-211ENST00000513984 C18orf15Q96N68 181 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 SPXQ9BT56 116 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 F8P00451 2351 aa10.88□□□□□ -0.67
VCAN-211ENST00000513984 JMJD1CQ15652 2540 aa10.87□□□□□ -0.67
VCAN-211ENST00000513984 M0QY20 66 aa10.87□□□□□ -0.67
VCAN-211ENST00000513984 ATP5LO75964 103 aa10.87□□□□□ -0.67
VCAN-211ENST00000513984 CTAG1AP78358 180 aa10.87□□□□□ -0.67
VCAN-211ENST00000513984 EDA2RQ9HAV5 297 aa10.87□□□□□ -0.67
VCAN-211ENST00000513984 UQCR10Q9UDW1 63 aa10.87□□□□□ -0.67
VCAN-211ENST00000513984 NUDT3O95989 172 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 MORN3Q6PF18 240 aaPredicted RBP10.86□□□□□ -0.67
VCAN-211ENST00000513984 CITED1Q99966 193 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 WFDC10AQ9H1F0 79 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 hDV102S1A0JD36 115 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 A8MWV9 139 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 UFSP1Q6NVU6 142 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 GOLT1BQ9Y3E0 138 aa10.86□□□□□ -0.67
VCAN-211ENST00000513984 NIPBLQ6KC79 2804 aaeCLIP10.86□□□□□ -0.67
VCAN-211ENST00000513984 HSBP1L1C9JCN9 74 aa10.85□□□□□ -0.67
VCAN-211ENST00000513984 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
VCAN-211ENST00000513984 INSL3P51460 131 aa10.85□□□□□ -0.67
VCAN-211ENST00000513984 IL17DQ8TAD2 202 aa10.85□□□□□ -0.67
VCAN-211ENST00000513984 TOMM6Q96B49 74 aa10.85□□□□□ -0.67
VCAN-211ENST00000513984 TRBV27A0A0K0K1C4 114 aa10.84□□□□□ -0.67
VCAN-211ENST00000513984 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
VCAN-211ENST00000513984 VCYO14598 125 aa10.84□□□□□ -0.67
VCAN-211ENST00000513984 AZU1P20160 251 aa10.84□□□□□ -0.67
VCAN-211ENST00000513984 ODF1Q14990 250 aa10.83□□□□□ -0.68
VCAN-211ENST00000513984 NEGR1Q7Z3B1 354 aa10.83□□□□□ -0.68
VCAN-211ENST00000513984 MRPL52Q86TS9 123 aaKnown RBP10.83□□□□□ -0.68
VCAN-211ENST00000513984 RNASE8Q8TDE3 154 aaKnown RBP10.83□□□□□ -0.68
VCAN-211ENST00000513984 H7C1H1 209 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 PRSS1P07477 247 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 C9orf66Q5T8R8 295 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 C2orf66Q6UXQ4 117 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 KIR2DL4Q99706 377 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 ZMAT4Q9H898 229 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 DKK2Q9UBU2 259 aa10.82□□□□□ -0.68
VCAN-211ENST00000513984 FLNBO75369 2602 aaKnown RBP10.82□□□□□ -0.68
VCAN-211ENST00000513984 IGHV3OR16-12A0A075B7B8 117 aa10.81□□□□□ -0.68
VCAN-211ENST00000513984 RHODO00212 210 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms