RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 USP9XQ93008 2570 aaPredicted RBP8.71□□□□□ -1.01
CTNND2-215ENST00000513588 KLHL30-AS1Q8NEE0 82 aa8.71□□□□□ -1.02
CTNND2-215ENST00000513588 PTPN13Q12923 2485 aa8.71□□□□□ -1.02
CTNND2-215ENST00000513588 TRAV2A0A0B4J234 112 aa8.71□□□□□ -1.02
CTNND2-215ENST00000513588 IGHG2P01859 326 aa8.71□□□□□ -1.02
CTNND2-215ENST00000513588 GATA3P23771 443 aa8.71□□□□□ -1.02
CTNND2-215ENST00000513588 BEX4Q9NWD9 120 aaPredicted RBP8.71□□□□□ -1.02
CTNND2-215ENST00000513588 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
CTNND2-215ENST00000513588 TTC32Q5I0X7 151 aa8.7□□□□□ -1.02
CTNND2-215ENST00000513588 TM2D2Q9BX73 214 aa8.7□□□□□ -1.02
CTNND2-215ENST00000513588 JPT2Q9H910 190 aa8.7□□□□□ -1.02
CTNND2-215ENST00000513588 PIFOQ8TCI5 191 aa8.7□□□□□ -1.02
CTNND2-215ENST00000513588 DUX3Q96PT4 197 aa8.7□□□□□ -1.02
CTNND2-215ENST00000513588 C19orf84I3L1E1 186 aa8.7□□□□□ -1.02
CTNND2-215ENST00000513588 AGRNO00468 2067 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 UFSP1Q6NVU6 142 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 TMEM141Q96I45 108 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 U3KQE9 123 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 DMXL1Q9Y485 3027 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 IGHV4-30-2A0A087WSY4 118 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 RPL39P62891 51 aaKnown RBP8.69□□□□□ -1.02
CTNND2-215ENST00000513588 SUMO4Q6EEV6 95 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 TRGV11A0A075B6L2 103 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 ZFP2Q6ZN57 461 aa8.69□□□□□ -1.02
CTNND2-215ENST00000513588 IGHV3OR16-12A0A075B7B8 117 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 E9PLD3 99 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 CD28P10747 220 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 ZMAT4Q9H898 229 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 IGHV4-4A0A075B6R2 117 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 MED14OSP0DP75 135 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 MYO18BQ8IUG5 2567 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 TRPT1Q86TN4 253 aaKnown RBP8.68□□□□□ -1.02
CTNND2-215ENST00000513588 C10orf105Q8TEF2 133 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 WNK1Q9H4A3 2382 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 TLN2Q9Y4G6 2542 aa8.68□□□□□ -1.02
CTNND2-215ENST00000513588 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 LGALS1P09382 135 aaKnown RBP8.67□□□□□ -1.02
CTNND2-215ENST00000513588 TEX29Q8N6K0 151 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 NEXN-AS1Q8NBZ9 246 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 MAPK1IP1LQ8NDC0 245 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 TACC2O95359 2948 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 NACAE9PAV3 2078 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 IGHV4-59P01825 116 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 RAX2Q96IS3 184 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 ASPMQ8IZT6 3477 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 CFAP47Q6ZTR5 3102 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 PSMG3-AS1Q96PY0 264 aa8.67□□□□□ -1.02
CTNND2-215ENST00000513588 NAV2Q8IVL1 2488 aa8.66□□□□□ -1.02
CTNND2-215ENST00000513588 A8MWV9 139 aa8.66□□□□□ -1.02
CTNND2-215ENST00000513588 J3QQQ9 107 aa8.66□□□□□ -1.02
CTNND2-215ENST00000513588 KALRNO60229 2985 aa8.66□□□□□ -1.02
CTNND2-215ENST00000513588 A6NDX4 124 aa8.66□□□□□ -1.02
CTNND2-215ENST00000513588 LINC01587Q99440 93 aa8.66□□□□□ -1.02
CTNND2-215ENST00000513588 KNCNA6PVL3 124 aa8.65□□□□□ -1.02
CTNND2-215ENST00000513588 SPXQ9BT56 116 aa8.65□□□□□ -1.02
CTNND2-215ENST00000513588 COX6CP09669 75 aa8.65□□□□□ -1.02
CTNND2-215ENST00000513588 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.02
CTNND2-215ENST00000513588 COX6B1P14854 86 aa8.65□□□□□ -1.02
CTNND2-215ENST00000513588 DEFB112Q30KQ8 113 aa8.65□□□□□ -1.02
CTNND2-215ENST00000513588 ERG28Q9UKR5 140 aa8.65□□□□□ -1.02
CTNND2-215ENST00000513588 INSL3P51460 131 aa8.65□□□□□ -1.03
CTNND2-215ENST00000513588 DEFB131AP59861 70 aa8.65□□□□□ -1.03
CTNND2-215ENST00000513588 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 PLEKHB2Q96CS7 222 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 I3L3M4 83 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 Q6ZS46 218 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 Q8N1Y9 231 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 K7EMT4 169 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 DSCR9P59020 149 aa8.64□□□□□ -1.03
CTNND2-215ENST00000513588 LINC01356Q8N9X3 169 aa8.63□□□□□ -1.03
CTNND2-215ENST00000513588 GAGE5Q13069 117 aa8.63□□□□□ -1.03
CTNND2-215ENST00000513588 GAGE6Q13070 117 aa8.63□□□□□ -1.03
CTNND2-215ENST00000513588 TCTEX1D4Q5JR98 221 aa8.63□□□□□ -1.03
CTNND2-215ENST00000513588 SPAG8Q99932 426 aaPredicted RBP8.63□□□□□ -1.03
CTNND2-215ENST00000513588 GPHB5Q86YW7 130 aa8.63□□□□□ -1.03
CTNND2-215ENST00000513588 PRO1854Q9UHT4 67 aa8.63□□□□□ -1.03
CTNND2-215ENST00000513588 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
CTNND2-215ENST00000513588 ZFAND6Q6FIF0 208 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 TIMM17AQ99595 171 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 SONP18583 2426 aaKnown RBP8.62□□□□□ -1.03
CTNND2-215ENST00000513588 CCDC168Q8NDH2 2452 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 LINC01546A6NGU7 62 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 MT-ATP8P03928 68 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 TIMM21Q9BVV7 248 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 SETD2Q9BYW2 2564 aaPredicted RBP8.62□□□□□ -1.03
CTNND2-215ENST00000513588 NRGNQ92686 78 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
CTNND2-215ENST00000513588 ATMQ13315 3056 aa8.62□□□□□ -1.03
CTNND2-215ENST00000513588 RHOHQ15669 191 aa8.61□□□□□ -1.03
CTNND2-215ENST00000513588 PEMTQ9UBM1 199 aa8.61□□□□□ -1.03
CTNND2-215ENST00000513588 POLQO75417 2590 aa8.61□□□□□ -1.03
CTNND2-215ENST00000513588 NPC2P61916 151 aa8.61□□□□□ -1.03
CTNND2-215ENST00000513588 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
CTNND2-215ENST00000513588 A0A0J9YX75 114 aa8.61□□□□□ -1.03
CTNND2-215ENST00000513588 C9JAW5 83 aa8.61□□□□□ -1.03
CTNND2-215ENST00000513588 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
CTNND2-215ENST00000513588 TRBV7-3A0A075B6L6 115 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms