RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ZNF415Q09FC8 603 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 MUC21Q5SSG8 566 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 SAPCD1Q5SSQ6 148 aa9.28□□□□□ -0.92
SPCS3-204ENST00000513139 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
SPCS3-204ENST00000513139 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 TRBV6-1A0A0K0K1D8 114 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 S100A9P06702 114 aaKnown RBP9.27□□□□□ -0.93
SPCS3-204ENST00000513139 CRIP1P50238 77 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 SRSF3P84103 164 aaKnown RBP9.27□□□□□ -0.93
SPCS3-204ENST00000513139 SMUG1Q53HV7 270 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 Q6AWC8 147 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 ZC2HC1AQ96GY0 325 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 MRPL16Q9NX20 251 aaKnown RBP9.27□□□□□ -0.93
SPCS3-204ENST00000513139 TP53TG3Q9ULZ0 132 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
SPCS3-204ENST00000513139 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
SPCS3-204ENST00000513139 C9JQL5 133 aa9.26□□□□□ -0.93
SPCS3-204ENST00000513139 GYPEP15421 78 aa9.26□□□□□ -0.93
SPCS3-204ENST00000513139 LINC01556Q5JQF7 62 aa9.26□□□□□ -0.93
SPCS3-204ENST00000513139 C11orf21Q9P2W6 132 aa9.26□□□□□ -0.93
SPCS3-204ENST00000513139 NAGKQ9UJ70 344 aa9.26□□□□□ -0.93
SPCS3-204ENST00000513139 FAT3Q8TDW7 4589 aa9.26□□□□□ -0.93
SPCS3-204ENST00000513139 IGHV1OR15-1A0A075B7D0 117 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 IGHV3-38A0A0C4DH36 116 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 SRP19P09132 144 aaKnown RBP9.25□□□□□ -0.93
SPCS3-204ENST00000513139 CEBPGP53567 150 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 TIRAPP58753 221 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 ZNF674Q2M3X9 581 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 CENPWQ5EE01 88 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 CLLU1Q5K131 121 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 TMEM183AQ8IXX5 376 aa9.25□□□□□ -0.93
SPCS3-204ENST00000513139 TRBV20OR9-2A0A075B6H5 130 aa9.24□□□□□ -0.93
SPCS3-204ENST00000513139 PGPEP1LA6NFU8 196 aa9.24□□□□□ -0.93
SPCS3-204ENST00000513139 C9JCJ5 164 aa9.24□□□□□ -0.93
SPCS3-204ENST00000513139 GNRH2O43555 120 aa9.24□□□□□ -0.93
SPCS3-204ENST00000513139 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
SPCS3-204ENST00000513139 COX8CQ7Z4L0 72 aa9.24□□□□□ -0.93
SPCS3-204ENST00000513139 MLST8Q9BVC4 326 aa9.24□□□□□ -0.93
SPCS3-204ENST00000513139 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
SPCS3-204ENST00000513139 FABP5P3A8MUU1 101 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 TMEM250H0YL14 139 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 SH2D1AO60880 128 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 IGLV2-8P01709 118 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
SPCS3-204ENST00000513139 GNG4P50150 75 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 TDRG1Q3Y452 100 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 FAM159AQ6UWV7 190 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 ZNF479Q96JC4 524 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 PARLQ9H300 379 aa9.23□□□□□ -0.93
SPCS3-204ENST00000513139 SFTA3P0C7M3 94 aa9.22□□□□□ -0.93
SPCS3-204ENST00000513139 PEA15Q15121 130 aa9.22□□□□□ -0.93
SPCS3-204ENST00000513139 FAM162BQ5T6X4 162 aa9.22□□□□□ -0.93
SPCS3-204ENST00000513139 PRR27Q6MZM9 219 aa9.22□□□□□ -0.93
SPCS3-204ENST00000513139 RASL10AQ92737 203 aa9.22□□□□□ -0.93
SPCS3-204ENST00000513139 Q9HAA7 133 aa9.22□□□□□ -0.93
SPCS3-204ENST00000513139 IGKV3D-20A0A0C4DH25 116 aa9.21□□□□□ -0.94
SPCS3-204ENST00000513139 MGST1P10620 155 aaKnown RBP9.21□□□□□ -0.94
SPCS3-204ENST00000513139 SCXQ7RTU7 201 aa9.21□□□□□ -0.94
SPCS3-204ENST00000513139 OCC1Q8TAD7 63 aa9.21□□□□□ -0.94
SPCS3-204ENST00000513139 TM2D2Q9BX73 214 aa9.21□□□□□ -0.94
SPCS3-204ENST00000513139 M0R036 132 aa9.2□□□□□ -0.94
SPCS3-204ENST00000513139 TYMSP04818 313 aa9.2□□□□□ -0.94
SPCS3-204ENST00000513139 LAGE3Q14657 143 aa9.2□□□□□ -0.94
SPCS3-204ENST00000513139 SPXQ9BT56 116 aa9.2□□□□□ -0.94
SPCS3-204ENST00000513139 PKHD1L1Q86WI1 4243 aa9.2□□□□□ -0.94
SPCS3-204ENST00000513139 TMSB15BA0A087X1C1 80 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 TRAV8-6A0A0B4J262 113 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 KRBOX1C9JBD0 128 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 K7EN84 100 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 NDUFS6O75380 124 aaKnown RBP9.19□□□□□ -0.94
SPCS3-204ENST00000513139 KCNS1Q96KK3 526 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 SMIM7Q9BQ49 75 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
SPCS3-204ENST00000513139 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
SPCS3-204ENST00000513139 TRAV4A0A0B4J268 109 aa9.18□□□□□ -0.94
SPCS3-204ENST00000513139 GRIFINA4D1Z8 144 aa9.18□□□□□ -0.94
SPCS3-204ENST00000513139 ZNF727A8MUV8 499 aa9.18□□□□□ -0.94
SPCS3-204ENST00000513139 B4DEV8 164 aa9.18□□□□□ -0.94
SPCS3-204ENST00000513139 RPL19P84098 196 aaKnown RBP9.18□□□□□ -0.94
SPCS3-204ENST00000513139 SMDT1Q9H4I9 107 aa9.18□□□□□ -0.94
SPCS3-204ENST00000513139 RS1O15537 224 aa9.17□□□□□ -0.94
SPCS3-204ENST00000513139 WFDC2Q14508 124 aa9.17□□□□□ -0.94
SPCS3-204ENST00000513139 LOC100131303A0A0U1RQF7 123 aa9.16□□□□□ -0.94
SPCS3-204ENST00000513139 C19orf71A6NCJ1 209 aa9.16□□□□□ -0.94
SPCS3-204ENST00000513139 OR10J3Q5JRS4 329 aa9.16□□□□□ -0.94
SPCS3-204ENST00000513139 DAZAP1Q96EP5 407 aaKnown RBP9.16□□□□□ -0.94
SPCS3-204ENST00000513139 SMIM12Q96EX1 92 aa9.16□□□□□ -0.94
SPCS3-204ENST00000513139 RNASE3P12724 160 aaKnown RBP9.15□□□□□ -0.94
SPCS3-204ENST00000513139 TMEM241Q24JQ0 296 aa9.15□□□□□ -0.94
SPCS3-204ENST00000513139 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
SPCS3-204ENST00000513139 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.94
SPCS3-204ENST00000513139 OR4C5Q8NGB2 326 aa9.15□□□□□ -0.94
SPCS3-204ENST00000513139 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
SPCS3-204ENST00000513139 RNASE7Q9H1E1 156 aaKnown RBP9.15□□□□□ -0.94
SPCS3-204ENST00000513139 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms