RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 PYYP10082 97 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 CDC34P49427 236 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-213ENST00000512665 RAB5CP51148 216 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 ZNF726P1Q15940 193 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 PRR9Q5T870 116 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 EIF5AL1Q6IS14 154 aaKnown RBP6.06□□□□□ -1.44
NEDD9-213ENST00000512665 MBD3L1Q8WWY6 194 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 AGPAT4-IT1Q9H0P7 198 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 PRELID1Q9Y255 219 aa6.06□□□□□ -1.44
NEDD9-213ENST00000512665 TRGV11A0A075B6L2 103 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 IGHV3-64A0A075B6Q5 118 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 IGHV3-16A0A0C4DH30 117 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 ERCC8Q13216 396 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 AKR1C8PQ5T2L2 129 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 Q6ZQT7 251 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 CLRN3Q8NCR9 226 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 PHYHIPLQ96FC7 376 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 DPH3Q96FX2 82 aa6.05□□□□□ -1.44
NEDD9-213ENST00000512665 TRAV1-1A0A0B4J248 108 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 OR7C2O60412 319 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 CXorf1O96002 111 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 CHTF8P0CG12 524 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 ARL14EPLP0DKL9 152 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 MGST1P10620 155 aaKnown RBP6.04□□□□□ -1.44
NEDD9-213ENST00000512665 SULT1A2P50226 295 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 CYB561D1Q8N8Q1 229 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 TMED6Q8WW62 240 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 TMEM167BQ9NRX6 74 aa6.04□□□□□ -1.44
NEDD9-213ENST00000512665 SNRPCP09234 159 aaKnown RBP6.03□□□□□ -1.44
NEDD9-213ENST00000512665 GCHFRP30047 84 aa6.03□□□□□ -1.44
NEDD9-213ENST00000512665 UBE2L3P68036 154 aaKnown RBP6.03□□□□□ -1.44
NEDD9-213ENST00000512665 LINC00479Q96M42 142 aa6.03□□□□□ -1.44
NEDD9-213ENST00000512665 ARL2-SNX15V9GYD0 113 aa6.03□□□□□ -1.44
NEDD9-213ENST00000512665 A0A1W2PRE2 83 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 RBAKDNA6NC62 111 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 H3BTX0 84 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 M0R3E3 92 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 FHITP49789 147 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 NKX2-5P52952 324 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-213ENST00000512665 CACNG7P62955 275 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 TMEM183BQ1AE95 376 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 TMEM183AQ8IXX5 376 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 NKX6-2Q9C056 277 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-213ENST00000512665 AAMDCQ9H7C9 122 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 OTORQ9NRC9 128 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 ZNF492Q9P255 531 aa6.02□□□□□ -1.45
NEDD9-213ENST00000512665 MUC17Q685J3 4493 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 A0A087WX48 190 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 MAP1LC3B2A6NCE7 125 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 HMGB3O15347 200 aaKnown RBP6.01□□□□□ -1.45
NEDD9-213ENST00000512665 EIF3GO75821 320 aaKnown RBP eCLIP6.01□□□□□ -1.45
NEDD9-213ENST00000512665 HLA-DQA1P01909 254 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 RANP62826 216 aaKnown RBP6.01□□□□□ -1.45
NEDD9-213ENST00000512665 SRSF3P84103 164 aaKnown RBP6.01□□□□□ -1.45
NEDD9-213ENST00000512665 MUC21Q5SSG8 566 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 TMEM78Q5T7P6 136 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 CFAP126Q5VTH2 177 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 Q6AWC8 147 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 ENHOQ6UWT2 76 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 Q6ZRP5 223 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 EXOC3-AS1Q8N2X6 119 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 LYPD6BQ8NI32 183 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 MAP1LC3BQ9GZQ8 125 aa6.01□□□□□ -1.45
NEDD9-213ENST00000512665 TRAV16A0A0A6YYK6 109 aaPredicted RBP6□□□□□ -1.45
NEDD9-213ENST00000512665 SERTM2A0A1B0GWG4 89 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 PGPA6NDG6 321 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 DIRC3C9JPN6 131 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 H2AFB1P0C5Y9 115 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 FAM74A1Q5RGS3 127 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 FAM159AQ6UWV7 190 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 FAM213BQ8TBF2 198 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 SFT2D1Q8WV19 159 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 TCEAL7Q9BRU2 100 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 LENEPQ9Y5L5 61 aa6□□□□□ -1.45
NEDD9-213ENST00000512665 FAM74A7A6NL05 159 aa5.99□□□□□ -1.45
NEDD9-213ENST00000512665 CRPP02741 224 aa5.99□□□□□ -1.45
NEDD9-213ENST00000512665 CSN1S1P47710 185 aa5.99□□□□□ -1.45
NEDD9-213ENST00000512665 LINC01547P58512 204 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-213ENST00000512665 MIAQ16674 131 aa5.99□□□□□ -1.45
NEDD9-213ENST00000512665 KCNIP4Q6PIL6 250 aa5.99□□□□□ -1.45
NEDD9-213ENST00000512665 C5orf17Q8NAS9 161 aa5.99□□□□□ -1.45
NEDD9-213ENST00000512665 TEX46H3BTG2 121 aa5.98□□□□□ -1.45
NEDD9-213ENST00000512665 ZNF138P52744 262 aa5.98□□□□□ -1.45
NEDD9-213ENST00000512665 FGF8P55075 233 aaPredicted RBP5.98□□□□□ -1.45
NEDD9-213ENST00000512665 SUMO1P63165 101 aaKnown RBP5.98□□□□□ -1.45
NEDD9-213ENST00000512665 BLOC1S1P78537 153 aa5.98□□□□□ -1.45
NEDD9-213ENST00000512665 TEX261Q6UWH6 196 aa5.98□□□□□ -1.45
NEDD9-213ENST00000512665 EPDR1Q9UM22 224 aa5.98□□□□□ -1.45
NEDD9-213ENST00000512665 IGKV2-40A0A087WW87 121 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-213ENST00000512665 NDUFS6O75380 124 aaKnown RBP5.97□□□□□ -1.45
NEDD9-213ENST00000512665 IGKV2D-40P01614 121 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-213ENST00000512665 TCRAP04437 139 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 TAGLN2P37802 199 aaKnown RBP5.97□□□□□ -1.45
NEDD9-213ENST00000512665 CCL20P78556 96 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 KRTAP26-1Q6PEX3 210 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 ALKAL2Q6UX46 152 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 COX8CQ7Z4L0 72 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 PRR26Q8N8Z3 221 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 TMEM75Q8N9X5 138 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms