RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 IGHV3-30-3P0DP02 117 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 ZNF80P51504 273 aaPredicted RBP4.79□□□□□ -1.64
USP46-208ENST00000512656 FGF8P55075 233 aaPredicted RBP4.79□□□□□ -1.64
USP46-208ENST00000512656 ZNF506Q5JVG8 444 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 DPPA3Q6W0C5 159 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 TMEM75Q8N9X5 138 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 HSD17B11Q8NBQ5 300 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 ACTR3CQ9C0K3 210 aaPredicted RBP4.79□□□□□ -1.64
USP46-208ENST00000512656 EPDR1Q9UM22 224 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 TNFSF18Q9UNG2 199 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 PGPEP1LA6NFU8 196 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 FABP5P3A8MUU1 101 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 GGTLC3B5MD39 225 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 ATP6V0CP27449 155 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 ASIPP42127 132 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 LGALSLQ3ZCW2 172 aaPredicted RBP4.78□□□□□ -1.64
USP46-208ENST00000512656 RMI2Q96E14 147 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 AQP10Q96PS8 301 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 NKX6-2Q9C056 277 aaPredicted RBP4.78□□□□□ -1.64
USP46-208ENST00000512656 URGCP-MRPS24S4R325 110 aa4.78□□□□□ -1.64
USP46-208ENST00000512656 BORCS7-ASMTA0A0B4J1R7 106 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 A0A1W2PRE2 83 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 RHODO00212 210 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 IFNA7P01567 189 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 IGLV2-11P01706 119 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 RNASE3P12724 160 aaKnown RBP4.77□□□□□ -1.65
USP46-208ENST00000512656 GAGE1Q13065 139 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 GAGE4Q13068 117 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 GAGE5Q13069 117 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
USP46-208ENST00000512656 INO80EQ8NBZ0 244 aaPredicted RBP4.77□□□□□ -1.65
USP46-208ENST00000512656 MED28Q9H204 178 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 PARLQ9H300 379 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 ALG5Q9Y673 324 aa4.77□□□□□ -1.65
USP46-208ENST00000512656 B4DEV8 164 aa4.76□□□□□ -1.65
USP46-208ENST00000512656 HAMPP81172 84 aa4.76□□□□□ -1.65
USP46-208ENST00000512656 ELOBQ15370 118 aa4.76□□□□□ -1.65
USP46-208ENST00000512656 KCNIP4Q6PIL6 250 aa4.76□□□□□ -1.65
USP46-208ENST00000512656 OR2T35Q8NGX2 323 aa4.76□□□□□ -1.65
USP46-208ENST00000512656 HIST1H2BAQ96A08 127 aa4.76□□□□□ -1.65
USP46-208ENST00000512656 IL36BQ9NZH7 164 aa4.76□□□□□ -1.65
USP46-208ENST00000512656 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 IGKV3D-20A0A0C4DH25 116 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 CTXND1A0A1B0GTU2 59 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 PEX7O00628 323 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 TRIAP1O43715 76 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 LINC00694P0DN24 101 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 DNLZQ5SXM8 178 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 DAZ4Q86SG3 579 aaKnown RBP4.75□□□□□ -1.65
USP46-208ENST00000512656 Q8N976 141 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 OR11H4Q8NGC9 324 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 LINC00479Q96M42 142 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 DAZ3Q9NR90 486 aaKnown RBP4.75□□□□□ -1.65
USP46-208ENST00000512656 ZFP30Q9Y2G7 519 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 PHLDA3Q9Y5J5 127 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 ARL2-SNX15V9GYD0 113 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 DNAH8Q96JB1 4490 aa4.75□□□□□ -1.65
USP46-208ENST00000512656 A0A087WX48 190 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 RBFOX3A6NFN3 312 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 KRBOX1C9JBD0 128 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 H3BVH4 76 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 LECT2O14960 151 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 PTTG1O95997 202 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 GIPP09681 153 aaPredicted RBP4.74□□□□□ -1.65
USP46-208ENST00000512656 ARMS2P0C7Q2 107 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 TPT1P13693 172 aaKnown RBP4.74□□□□□ -1.65
USP46-208ENST00000512656 UBE2G2P60604 165 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 UBE2G1P62253 170 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 AKR1C8PQ5T2L2 129 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 FAM162BQ5T6X4 162 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 FAM74A4Q5TZK3 123 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 RPL7L1Q6DKI1 246 aaKnown RBP4.74□□□□□ -1.65
USP46-208ENST00000512656 UFSP1Q6NVU6 142 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 Q6ZSA8 131 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 COX8CQ7Z4L0 72 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 Q86TA4 180 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 FMC1Q96HJ9 113 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 TCEAL7Q9BRU2 100 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 CHCHD7Q9BUK0 85 aa4.74□□□□□ -1.65
USP46-208ENST00000512656 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.73□□□□□ -1.65
USP46-208ENST00000512656 IGKV2D-24A0A075B6R9 120 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 TRBV10-1A0A0K0K1A3 114 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 M0R036 132 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 SH2D1AO60880 128 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 RPL36AP83881 106 aaKnown RBP4.73□□□□□ -1.65
USP46-208ENST00000512656 Q0VG73 95 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 WFDC2Q14508 124 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 NIT1Q86X76 327 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 ZFP82Q8N141 532 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 C14orf178Q8N769 122 aaPredicted RBP4.73□□□□□ -1.65
USP46-208ENST00000512656 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.73□□□□□ -1.65
USP46-208ENST00000512656 STOML3Q8TAV4 291 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 DEFB104AQ8WTQ1 72 aa4.73□□□□□ -1.65
USP46-208ENST00000512656 BAALCQ8WXS3 180 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms