RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FANCMQ8IYD8 2048 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 TRBV24-1A0A075B6N3 115 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 K7EMI3 77 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 CEND1Q8N111 149 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 DHRS4-AS1Q9P1J3 65 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 COL6A6A6NMZ7 2263 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 MARF1Q9Y4F3 1742 aaKnown RBP6.81□□□□□ -1.32
VCAN-208ENST00000512590 Q8NA96 180 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 C11orf52Q96A22 123 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 IMUPQ9GZP8 106 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
VCAN-208ENST00000512590 XAGE1AQ9HD64 81 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 COL24A1Q17RW2 1714 aa6.81□□□□□ -1.32
VCAN-208ENST00000512590 IGLV1-44P01699 117 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 AKAP6Q13023 2319 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 SERTAD4-AS1Q5TG53 156 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 FLVCR1-AS1Q8TAF5 88 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 C16orf90A8MZG2 172 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 TNFRSF13BO14836 293 aaPredicted RBP6.8□□□□□ -1.32
VCAN-208ENST00000512590 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 A0A0J9YXV3 536 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 Q6ZTI0 123 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 CABIN1Q9Y6J0 2220 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 THSD7AQ9UPZ6 1657 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 TRAV23DV6A0A075B6W5 121 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 Q6ZSV7 163 aa6.8□□□□□ -1.32
VCAN-208ENST00000512590 WI2-2373I1.2A0A1W2PRP0 233 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 TP53BP1Q12888 1972 aaPredicted RBP6.79□□□□□ -1.32
VCAN-208ENST00000512590 WT1-ASQ06250 92 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 Q6ZSR3 168 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 C2orf48Q96LS8 159 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 STRCP1A6NGW2 1772 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 ESRGQ1W209 222 aa6.79□□□□□ -1.32
VCAN-208ENST00000512590 RP1P56715 2156 aa6.78□□□□□ -1.32
VCAN-208ENST00000512590 GTF3C1Q12789 2109 aa6.78□□□□□ -1.32
VCAN-208ENST00000512590 M0QXV9 152 aa6.78□□□□□ -1.32
VCAN-208ENST00000512590 PI4KAP42356 2102 aa6.78□□□□□ -1.32
VCAN-208ENST00000512590 C19orf84I3L1E1 186 aa6.78□□□□□ -1.32
VCAN-208ENST00000512590 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
VCAN-208ENST00000512590 MDFIQ99750 246 aa6.78□□□□□ -1.32
VCAN-208ENST00000512590 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
VCAN-208ENST00000512590 DLEC1Q9Y238 1755 aa6.77□□□□□ -1.33
VCAN-208ENST00000512590 ATRAIDQ6UW56 229 aa6.77□□□□□ -1.33
VCAN-208ENST00000512590 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
VCAN-208ENST00000512590 C19orf71A6NCJ1 209 aa6.77□□□□□ -1.33
VCAN-208ENST00000512590 IGHV6-1A0A0B4J1U7 121 aa6.77□□□□□ -1.33
VCAN-208ENST00000512590 ATOX1O00244 68 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 MIA3Q5JRA6 1907 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 HIST2H2BDQ6DRA6 164 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 BBC3Q96PG8 261 aaPredicted RBP6.76□□□□□ -1.33
VCAN-208ENST00000512590 V9GYV3 84 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 COL5A3P25940 1745 aaPredicted RBP6.76□□□□□ -1.33
VCAN-208ENST00000512590 SRCAPQ6ZRS2 3230 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 SMR3AQ99954 134 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 CARHSP1Q9Y2V2 147 aaKnown RBP6.76□□□□□ -1.33
VCAN-208ENST00000512590 C3orf84H3BNL1 204 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 LGALS9BQ3B8N2 356 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 LGALS9CQ6DKI2 356 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 LYPD6Q86Y78 171 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 WDR90Q96KV7 1748 aa6.76□□□□□ -1.33
VCAN-208ENST00000512590 FHL2Q14192 279 aa6.75□□□□□ -1.33
VCAN-208ENST00000512590 OTOFQ9HC10 1997 aa6.75□□□□□ -1.33
VCAN-208ENST00000512590 ANKRD31Q8N7Z5 1873 aa6.75□□□□□ -1.33
VCAN-208ENST00000512590 F8W1H4 67 aa6.75□□□□□ -1.33
VCAN-208ENST00000512590 H7C423 109 aa6.75□□□□□ -1.33
VCAN-208ENST00000512590 YLPM1P49750 1951 aaKnown RBP6.75□□□□□ -1.33
VCAN-208ENST00000512590 LOC100131303A0A0U1RQF7 123 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 M0R378 163 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 IGLC2P0DOY2 106 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 IGLC3P0DOY3 106 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 Q5BKY6 102 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 A6NED7 52 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 ODF3BA8MYP8 253 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 LELP1Q5T871 98 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 ASPHD1Q5U4P2 390 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 TUBGCP6Q96RT7 1819 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 CADP27708 2225 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 A0A0J9YX75 114 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 ACYP2P14621 99 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 UBR3Q6ZT12 1888 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 Q6ZRM9 215 aa6.74□□□□□ -1.33
VCAN-208ENST00000512590 CSDC2Q9Y534 153 aaKnown RBP6.74□□□□□ -1.33
VCAN-208ENST00000512590 CCKP06307 115 aa6.73□□□□□ -1.33
VCAN-208ENST00000512590 SCN2AQ99250 2005 aa6.73□□□□□ -1.33
VCAN-208ENST00000512590 K7ERJ3 54 aa6.73□□□□□ -1.33
VCAN-208ENST00000512590 LINC01006Q8NI28 216 aa6.73□□□□□ -1.33
VCAN-208ENST00000512590 IGLV11-55A0A075B6I3 123 aa6.73□□□□□ -1.33
VCAN-208ENST00000512590 MCM3APO60318 1980 aa6.73□□□□□ -1.33
VCAN-208ENST00000512590 DLEU1O43261 78 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 FXYD5Q96DB9 178 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 V9GYY9 64 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 RPL39P62891 51 aaKnown RBP6.72□□□□□ -1.33
VCAN-208ENST00000512590 MDFICQ9P1T7 246 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 NCOR1O75376 2440 aa6.72□□□□□ -1.33
VCAN-208ENST00000512590 PLA2G2EQ9NZK7 142 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms