RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 AGRNO00468 2067 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 IGSF10Q6WRI0 2623 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 COX6B1P14854 86 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 SCGB2A2Q13296 93 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 PMVKQ15126 192 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 Q6YL49 198 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 FOXI2Q6ZQN5 318 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 PRADC1Q9BSG0 188 aa10.59□□□□□ -0.71
AP003555.1-202ENST00000511013 K7ERJ3 54 aa10.58□□□□□ -0.72
AP003555.1-202ENST00000511013 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 IGLL5B9A064 214 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 FSHBP01225 129 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 MDFICQ9P1T7 246 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 MYO18BQ8IUG5 2567 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 MAP1AP78559 2803 aaPredicted RBP10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 CRYGDP07320 174 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 HOXD3P31249 432 aaPredicted RBP10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 RHOHQ15669 191 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 ZNF56Q15929 161 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 Q8N1Y9 231 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 ZNF702PQ9H963 129 aa10.57□□□□□ -0.72
AP003555.1-202ENST00000511013 TRAV12-2A0A075B6T6 113 aa10.56□□□□□ -0.72
AP003555.1-202ENST00000511013 A0A1B0GWB2 263 aa10.56□□□□□ -0.72
AP003555.1-202ENST00000511013 ZNF815PA8K554 130 aa10.56□□□□□ -0.72
AP003555.1-202ENST00000511013 TSHBP01222 138 aa10.56□□□□□ -0.72
AP003555.1-202ENST00000511013 FAM74A4Q5TZK3 123 aa10.56□□□□□ -0.72
AP003555.1-202ENST00000511013 M0QY20 66 aa10.55□□□□□ -0.72
AP003555.1-202ENST00000511013 SPINK13Q1W4C9 94 aa10.55□□□□□ -0.72
AP003555.1-202ENST00000511013 ZNF479Q96JC4 524 aa10.55□□□□□ -0.72
AP003555.1-202ENST00000511013 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 TMEM238LA0A1B0GVL6 79 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 C11orf86A6NJI1 115 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 A6NJY4 79 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 NSUN5P1Q3KNT7 163 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 SVEP1Q4LDE5 3571 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 IGHV4-31P0DP07 118 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 RRN3P1Q2M238 152 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 CD300EQ496F6 205 aaPredicted RBP10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 AMTNQ6UX39 209 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 ZNF256Q9Y2P7 627 aaPredicted RBP10.54□□□□□ -0.72
AP003555.1-202ENST00000511013 USP9YO00507 2555 aaPredicted RBP10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 G3V4G9 280 aa10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 HOXA3O43365 443 aaPredicted RBP10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 TCTEX1D4Q5JR98 221 aa10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 CELSR1Q9NYQ6 3014 aa10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 ACACBO00763 2458 aa10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
AP003555.1-202ENST00000511013 SAP30O75446 220 aa10.52□□□□□ -0.72
AP003555.1-202ENST00000511013 MORN3Q6PF18 240 aaPredicted RBP10.52□□□□□ -0.72
AP003555.1-202ENST00000511013 MAPK1IP1LQ8NDC0 245 aa10.52□□□□□ -0.72
AP003555.1-202ENST00000511013 I3L3M4 83 aa10.52□□□□□ -0.73
AP003555.1-202ENST00000511013 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.73
AP003555.1-202ENST00000511013 DUX5Q96PT3 197 aa10.52□□□□□ -0.73
AP003555.1-202ENST00000511013 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.73
AP003555.1-202ENST00000511013 A8MTW9 85 aa10.51□□□□□ -0.73
AP003555.1-202ENST00000511013 F8W1H4 67 aa10.51□□□□□ -0.73
AP003555.1-202ENST00000511013 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
AP003555.1-202ENST00000511013 COL12A1Q99715 3063 aa10.51□□□□□ -0.73
AP003555.1-202ENST00000511013 C21orf62-AS1Q17RA5 79 aa10.5□□□□□ -0.73
AP003555.1-202ENST00000511013 NFE4Q86UQ8 179 aa10.5□□□□□ -0.73
AP003555.1-202ENST00000511013 Q8N2B8 174 aa10.5□□□□□ -0.73
AP003555.1-202ENST00000511013 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
AP003555.1-202ENST00000511013 SORL1Q92673 2214 aa10.5□□□□□ -0.73
AP003555.1-202ENST00000511013 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 CELSR2Q9HCU4 2923 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 PRRC2AP48634 2157 aaKnown RBP10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 EMP1P54849 157 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 DEFB131AP59861 70 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 Q5PR19 223 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 LRRC75A-AS1Q8N1F1 130 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 SPANXB1Q9NS25 103 aaPredicted RBP10.49□□□□□ -0.73
AP003555.1-202ENST00000511013 CR1P17927 2039 aa10.48□□□□□ -0.73
AP003555.1-202ENST00000511013 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
AP003555.1-202ENST00000511013 SLURP1P55000 103 aa10.48□□□□□ -0.73
AP003555.1-202ENST00000511013 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
AP003555.1-202ENST00000511013 DEFB104AQ8WTQ1 72 aa10.48□□□□□ -0.73
AP003555.1-202ENST00000511013 PTH2Q96A98 100 aa10.48□□□□□ -0.73
AP003555.1-202ENST00000511013 FAM208BQ5VWN6 2430 aa10.48□□□□□ -0.73
AP003555.1-202ENST00000511013 A0A0J9YY99 117 aa10.47□□□□□ -0.73
AP003555.1-202ENST00000511013 H3BMM0 161 aa10.47□□□□□ -0.73
AP003555.1-202ENST00000511013 UBE2D1P51668 147 aa10.47□□□□□ -0.73
AP003555.1-202ENST00000511013 ZNRF2Q8NHG8 242 aa10.47□□□□□ -0.73
AP003555.1-202ENST00000511013 CREBBPQ92793 2442 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms