RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 OR5AC2Q9NZP5 309 aa6.36□□□□□ -1.39
SNF8-207ENST00000509995 GCGP01275 180 aa6.35□□□□□ -1.39
SNF8-207ENST00000509995 CFC1BP0CG36 223 aa6.35□□□□□ -1.39
SNF8-207ENST00000509995 UBE2L3P68036 154 aaKnown RBP6.35□□□□□ -1.39
SNF8-207ENST00000509995 AP3S1Q92572 193 aa6.35□□□□□ -1.39
SNF8-207ENST00000509995 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
SNF8-207ENST00000509995 NDFIP1Q9BT67 221 aa6.35□□□□□ -1.39
SNF8-207ENST00000509995 LYRM2Q9NU23 88 aaPredicted RBP6.35□□□□□ -1.39
SNF8-207ENST00000509995 A0A1W2PNN7 141 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 CST7O76096 145 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 MBPP02686 304 aaPredicted RBP6.34□□□□□ -1.39
SNF8-207ENST00000509995 FGF7P21781 194 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 PTTG1IPP53801 180 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 TMEM97Q5BJF2 176 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 SPANXN2Q5MJ10 180 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.34□□□□□ -1.39
SNF8-207ENST00000509995 NEXN-AS1Q8NBZ9 246 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 CMTM2Q8TAZ6 248 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 MITD1Q8WV92 249 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 KRTAP4-1Q9BYQ7 146 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 IL36BQ9NZH7 164 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 RAB26Q9ULW5 256 aa6.34□□□□□ -1.39
SNF8-207ENST00000509995 CARHSP1Q9Y2V2 147 aaKnown RBP6.34□□□□□ -1.39
SNF8-207ENST00000509995 TRBV25-1A0A075B6N4 114 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 TRAV6A0A075B6T7 132 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
SNF8-207ENST00000509995 VBP1P61758 197 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 PRR27Q6MZM9 219 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 SFRP2Q96HF1 295 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 CARD19Q96LW7 228 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 NPCDR1Q9BY65 106 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 OTORQ9NRC9 128 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
SNF8-207ENST00000509995 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
SNF8-207ENST00000509995 H3BVH4 76 aa6.32□□□□□ -1.4
SNF8-207ENST00000509995 EIF5AP63241 154 aaKnown RBP6.32□□□□□ -1.4
SNF8-207ENST00000509995 FAM162BQ5T6X4 162 aa6.32□□□□□ -1.4
SNF8-207ENST00000509995 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
SNF8-207ENST00000509995 PHF5AQ7RTV0 110 aaKnown RBP6.32□□□□□ -1.4
SNF8-207ENST00000509995 OR11H4Q8NGC9 324 aa6.32□□□□□ -1.4
SNF8-207ENST00000509995 SGK494Q96LW2 274 aa6.32□□□□□ -1.4
SNF8-207ENST00000509995 VCX3BQ9H321 246 aa6.32□□□□□ -1.4
SNF8-207ENST00000509995 IGLV4-60A0A075B6I1 120 aa6.31□□□□□ -1.4
SNF8-207ENST00000509995 SPCS2Q15005 226 aa6.31□□□□□ -1.4
SNF8-207ENST00000509995 IQCJQ1A5X6 159 aa6.31□□□□□ -1.4
SNF8-207ENST00000509995 IAH1Q2TAA2 248 aaPredicted RBP6.31□□□□□ -1.4
SNF8-207ENST00000509995 ZFP69Q49AA0 526 aa6.31□□□□□ -1.4
SNF8-207ENST00000509995 FAM74A1Q5RGS3 127 aa6.31□□□□□ -1.4
SNF8-207ENST00000509995 DERL1Q9BUN8 251 aa6.31□□□□□ -1.4
SNF8-207ENST00000509995 RPP21Q9H633 154 aaKnown RBP6.31□□□□□ -1.4
SNF8-207ENST00000509995 IGLV7-46A0A075B6I9 117 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 TRBV6-1A0A0K0K1D8 114 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 A0A1B0GUV1 79 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 L7N2F9 121 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 EIF3GO75821 320 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNF8-207ENST00000509995 BCAP31P51572 246 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 VAMP2P63027 116 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 GNG5P63218 68 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 MT1HP80294 61 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 GAGE2BQ13066 116 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 IL18Q14116 193 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 CTF1Q16619 201 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 ZNF674Q2M3X9 581 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 ASB16-AS1Q495Z4 193 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 SMUG1Q53HV7 270 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
SNF8-207ENST00000509995 MCFD2Q8NI22 146 aa6.3□□□□□ -1.4
SNF8-207ENST00000509995 IGHV1-24A0A0C4DH33 117 aa6.29□□□□□ -1.4
SNF8-207ENST00000509995 SULT1A2P50226 295 aa6.29□□□□□ -1.4
SNF8-207ENST00000509995 RAB4BP61018 213 aa6.29□□□□□ -1.4
SNF8-207ENST00000509995 GSKIPQ9P0R6 139 aa6.29□□□□□ -1.4
SNF8-207ENST00000509995 SSPOA2VEC9 5147 aa6.29□□□□□ -1.4
SNF8-207ENST00000509995 C9orf170A2RU37 121 aa6.28□□□□□ -1.4
SNF8-207ENST00000509995 M0R381 172 aa6.28□□□□□ -1.4
SNF8-207ENST00000509995 RGS5O15539 181 aa6.28□□□□□ -1.4
SNF8-207ENST00000509995 ARMS2P0C7Q2 107 aa6.28□□□□□ -1.4
SNF8-207ENST00000509995 S100A11P31949 105 aa6.28□□□□□ -1.4
SNF8-207ENST00000509995 FAUP35544 74 aaKnown RBP6.28□□□□□ -1.4
SNF8-207ENST00000509995 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
SNF8-207ENST00000509995 AQP10Q96PS8 301 aa6.28□□□□□ -1.4
SNF8-207ENST00000509995 SLC25A21Q9BQT8 299 aaPredicted RBP6.28□□□□□ -1.4
SNF8-207ENST00000509995 A0A087WZ39 114 aa6.27□□□□□ -1.41
SNF8-207ENST00000509995 LOC107984640A0A0U1RRK4 108 aa6.27□□□□□ -1.41
SNF8-207ENST00000509995 SULT1A1P50225 295 aa6.27□□□□□ -1.41
SNF8-207ENST00000509995 ZNF56Q15929 161 aa6.27□□□□□ -1.41
SNF8-207ENST00000509995 KHDC3LQ587J8 217 aa6.27□□□□□ -1.41
SNF8-207ENST00000509995 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
SNF8-207ENST00000509995 LINC00526Q96FQ7 95 aa6.27□□□□□ -1.41
SNF8-207ENST00000509995 SERTM2A0A1B0GWG4 89 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 B4DEV8 164 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 HBG1P69891 147 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 HBG2P69892 147 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 DNLZQ5SXM8 178 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 OR5C1Q8NGR4 320 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
SNF8-207ENST00000509995 FUNDC2Q9BWH2 189 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 C11orf1Q9H5F2 150 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 MBD2Q9UBB5 411 aa6.26□□□□□ -1.41
SNF8-207ENST00000509995 PSG8Q9UQ74 426 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms