RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 USP24Q9UPU5 2620 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 IGKV2-40A0A087WW87 121 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 IGHV7-4-1A0A0J9YVY3 117 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 LGALS9O00182 355 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 TGFAP01135 160 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 IGKV2D-40P01614 121 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 ARMS2P0C7Q2 107 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 LINC00614P0C842 121 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 SSTP61278 116 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 CACNG7P62955 275 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 NIT1Q86X76 327 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 Q8N2B8 174 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 OR4X2Q8NGF9 303 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 PEF1Q9UBV8 284 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 HSPB8Q9UJY1 196 aa4.89□□□□□ -1.63
TRAPPC11-206ENST00000509857 RELNP78509 3460 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 MYO18BQ8IUG5 2567 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 TRAV8-2A0A0B4J237 113 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 LINC01546A6NGU7 62 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 SNAI2O43623 268 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 AZU1P20160 251 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 LY6EQ16553 131 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 DEFB112Q30KQ8 113 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 LYZL1Q6UWQ5 148 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 SPATA12Q7Z6I5 190 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 ORMDL3Q8N138 153 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 OR10J6PQ8NGY7 276 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 UBE2E2Q96LR5 201 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 VAMP8Q9BV40 100 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 AGPAT4-IT1Q9H0P7 198 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 SMPXQ9UHP9 88 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 PTPN13Q12923 2485 aa4.88□□□□□ -1.63
TRAPPC11-206ENST00000509857 LRBAP50851 2863 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 CFAP46Q8IYW2 2715 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 TRAV2A0A0B4J234 112 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 TRAV21A0A0B4J279 112 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 A0A1B0GUS0 222 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF705FA8MVS1 300 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 M0R2Z0 102 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 LGALS1P09382 135 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 C3orf79P0CE67 100 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF705DP0CH99 300 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF705BP0CI00 300 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 BLCAPP62952 87 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 SCGB2A2Q13296 93 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 SMIM15Q7Z3B0 74 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 OR10AG1Q8NH19 301 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 FAM19A4Q96LR4 140 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 SPXQ9BT56 116 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 TMEM70Q9BUB7 260 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 RHPN1-AS1Q9BWJ2 59 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF462Q96JM2 2506 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 USP9YO00507 2555 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 CR1P17927 2039 aa4.87□□□□□ -1.63
TRAPPC11-206ENST00000509857 DCHS2Q6V1P9 2916 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 IGHV3-35A0A0C4DH35 117 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 A0A0U1RRA0 63 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 C2orf70A6NJV1 201 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 K7EMI3 77 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 LEPROTL1O95214 131 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 PPP1R17O96001 155 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 ORM1P02763 201 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF80P51504 273 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 RNASEKQ6P5S7 137 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 FA2HQ7L5A8 372 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 Q8N976 141 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF738Q8NE65 137 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 C14orf144Q96I85 54 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 MIEN1Q9BRT3 115 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 C2orf88Q9BSF0 95 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 NXT2Q9NPJ8 142 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 Q9UF83 564 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 LRRK2Q5S007 2527 aa4.86□□□□□ -1.63
TRAPPC11-206ENST00000509857 NAV2Q8IVL1 2488 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 ANKRD17O75179 2603 aaKnown RBP4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 IGHV1-24A0A0C4DH33 117 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 PRB1P04280 392 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 NTF3P20783 257 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 HLA-DMBP28068 263 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 KRTDAPP60985 99 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 UNQ9165/PRO28630Q6UXU0 137 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZFAND2AQ8N6M9 145 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 OR8A1Q8NGG7 326 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 MRAP2Q96G30 205 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 PRELID3AQ96N28 172 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 MAP1LC3CQ9BXW4 147 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 MS4A6AQ9H2W1 248 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF702PQ9H963 129 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 ST20Q9HBF5 79 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 UQCR10Q9UDW1 63 aa4.85□□□□□ -1.63
TRAPPC11-206ENST00000509857 SYS1-DBNDD2H3BUS1 97 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 M0R381 172 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 TCF21O43680 179 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 DUSP14O95147 198 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 TRBV12-3P01733 135 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 TSPOP30536 169 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 CKS2P33552 79 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 LEPP41159 167 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 SNRPD3P62318 126 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms