RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 PATE4P0C8F1 98 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 RPL28P46779 137 aaKnown RBP1.65□□□□□ -2.15
CAST-226ENST00000509529 NANOS2P60321 138 aaKnown RBP1.65□□□□□ -2.15
CAST-226ENST00000509529 TMEM155Q4W5P6 130 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 C19orf54Q5BKX5 351 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 CEMP1Q6PRD7 247 aaPredicted RBP1.65□□□□□ -2.15
CAST-226ENST00000509529 C9orf139Q6ZV77 190 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 FAM110DQ8TAY7 271 aaPredicted RBP1.65□□□□□ -2.15
CAST-226ENST00000509529 RPP25Q9BUL9 199 aaKnown RBP1.65□□□□□ -2.15
CAST-226ENST00000509529 BPESC1Q9GZL8 116 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 IGKV1D-17A0A075B6S4 117 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 KNCNA6PVL3 124 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 NDUFA1O15239 70 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 IGKV1-17P01599 117 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 TIRAPP58753 221 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 TSPEAR-AS2P59090 65 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 LINC00315P59091 139 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 DEFB114Q30KQ6 69 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 FAM53AQ6NSI3 398 aaPredicted RBP1.65□□□□□ -2.15
CAST-226ENST00000509529 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 PRNTQ86SH4 94 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 LINC01561Q8N1V8 128 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 CCL4L1Q8NHW4 92 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 C17orf77Q96MU5 243 aa1.65□□□□□ -2.15
CAST-226ENST00000509529 TDRD6O60522 2096 aaKnown RBP1.65□□□□□ -2.15
CAST-226ENST00000509529 DOCK8Q8NF50 2099 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 TET2Q6N021 2002 aaPredicted RBP1.64□□□□□ -2.15
CAST-226ENST00000509529 IGLV3-9A0A075B6K5 115 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 LOC110117498A0A087WWA1 95 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 IGHV1-3A0A0C4DH29 117 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 IGLV5-39A0A0G2JS06 123 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.64□□□□□ -2.15
CAST-226ENST00000509529 USP17L23D6RBM5 183 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 K7EIM0 57 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 NDUFA3O95167 84 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 LY6G6DO95868 133 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 CD24P25063 80 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 SSR4P51571 173 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 CXCL6P80162 114 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 HOXA4Q00056 320 aaPredicted RBP1.64□□□□□ -2.15
CAST-226ENST00000509529 ASB16-AS1Q495Z4 193 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 SFTA2Q6UW10 78 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 HRCT1Q6UXD1 115 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 C2orf66Q6UXQ4 117 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 NPBQ8NG41 125 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 SAP25Q8TEE9 199 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 C10orf105Q8TEF2 133 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 TTTY13Q9BZ97 58 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 KAAG1Q9UBP8 84 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 IGHV1-58A0A0C4DH39 117 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 A0A1B0GW54 56 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 H0YGX0 51 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 I3L3M4 83 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 VCYO14598 125 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 VPREB1P12018 145 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 SYNJ2BPP57105 145 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 Q0VFX4 171 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 CD164L2Q6UWJ8 174 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 MUSTN1Q8IVN3 82 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 ITLN2Q8WWU7 325 aaPredicted RBP1.64□□□□□ -2.15
CAST-226ENST00000509529 LINC00477Q96M19 166 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 LINC00467Q9BRT7 94 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 DEFB126Q9BYW3 111 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 CYSTM1Q9H1C7 97 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 MRPL36Q9P0J6 103 aaKnown RBP1.64□□□□□ -2.15
CAST-226ENST00000509529 SHANK1Q9Y566 2161 aa1.64□□□□□ -2.15
CAST-226ENST00000509529 IGKV3D-20A0A0C4DH25 116 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 E7EQL1 145 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 CCKP06307 115 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 LGALS3P17931 250 aaKnown RBP1.63□□□□□ -2.15
CAST-226ENST00000509529 XCL1P47992 114 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 TCF15Q12870 199 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 RPL39P5Q59GN2 51 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 C9orf66Q5T8R8 295 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 SCGB1D4Q6XE38 83 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 Q8NA96 180 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 XCL2Q9UBD3 114 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 IGLV11-55A0A075B6I3 123 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 TRBV7-4A0A0J9YYF1 115 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 LOC389332A0A1B0GUA5 103 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 MRPL33O75394 65 aaKnown RBP1.63□□□□□ -2.15
CAST-226ENST00000509529 GATA1P15976 413 aaPredicted RBP1.63□□□□□ -2.15
CAST-226ENST00000509529 PDE6GP18545 87 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 UBE2E1P51965 193 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 DEFB110Q30KQ9 67 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 SPINK9Q5DT21 86 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 GFRALQ6UXV0 394 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 DAZ4Q86SG3 579 aaKnown RBP1.63□□□□□ -2.15
CAST-226ENST00000509529 STHQ8IWL8 128 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 Q8N2B8 174 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 EXOC3-AS1Q8N2X6 119 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 MBD3L2Q8NHZ7 208 aaPredicted RBP1.63□□□□□ -2.15
CAST-226ENST00000509529 MUC7Q8TAX7 377 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 GAFA1Q96PS6 74 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 TM2D3Q9BRN9 247 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 A8MTW9 85 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 JMJD7-PLA2G4BH0Y9G9 81 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 LY6HO94772 140 aa1.63□□□□□ -2.15
CAST-226ENST00000509529 RPL35AP18077 110 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms