RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 SVBPQ8N300 66 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 C14orf178Q8N769 122 aaPredicted RBP10.45□□□□□ -0.74
RNF4-213ENST00000509388 NUP35Q8NFH5 326 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 CTDSP1Q9GZU7 261 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 PRO0255Q9UI72 69 aa10.45□□□□□ -0.74
RNF4-213ENST00000509388 TRAV26-1A0A087WT03 109 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 A0A0J9YY99 117 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 PAX4O43316 350 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 RIGQ13278 110 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 CASC10Q5T4H9 136 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 CLRN3Q8NCR9 226 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 SAMD10Q9BYL1 202 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 MSRB1Q9NZV6 116 aa10.44□□□□□ -0.74
RNF4-213ENST00000509388 F5H697 171 aa10.43□□□□□ -0.74
RNF4-213ENST00000509388 SNAPINO95295 136 aa10.43□□□□□ -0.74
RNF4-213ENST00000509388 RHEBQ15382 184 aa10.43□□□□□ -0.74
RNF4-213ENST00000509388 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
RNF4-213ENST00000509388 C7orf77A4D0Y5 90 aa10.42□□□□□ -0.74
RNF4-213ENST00000509388 CRYGDP07320 174 aa10.42□□□□□ -0.74
RNF4-213ENST00000509388 CRYBA4P53673 196 aa10.42□□□□□ -0.74
RNF4-213ENST00000509388 TCTAP57738 103 aa10.42□□□□□ -0.74
RNF4-213ENST00000509388 ZNF56Q15929 161 aa10.42□□□□□ -0.74
RNF4-213ENST00000509388 KCNIP4Q6PIL6 250 aa10.42□□□□□ -0.74
RNF4-213ENST00000509388 PRADC1Q9BSG0 188 aa10.42□□□□□ -0.74
RNF4-213ENST00000509388 NUDT3O95989 172 aa10.41□□□□□ -0.74
RNF4-213ENST00000509388 MGPP08493 103 aa10.41□□□□□ -0.74
RNF4-213ENST00000509388 GATA1P15976 413 aaPredicted RBP10.41□□□□□ -0.74
RNF4-213ENST00000509388 EVI2AP22794 236 aa10.41□□□□□ -0.74
RNF4-213ENST00000509388 S100PP25815 95 aa10.41□□□□□ -0.74
RNF4-213ENST00000509388 FAM3BP58499 235 aaPredicted RBP10.41□□□□□ -0.74
RNF4-213ENST00000509388 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
RNF4-213ENST00000509388 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
RNF4-213ENST00000509388 A0A1B0GW15 77 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 TRBV6-4A0A1B0GX49 114 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 H3BNG1 76 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 S100A8P05109 93 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 RHOHQ15669 191 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 IMMP2LQ96T52 175 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 TMEM242Q9NWH2 141 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 MUC4Q99102 2169 aa10.4□□□□□ -0.74
RNF4-213ENST00000509388 A0A087WWC5 75 aa10.39□□□□□ -0.75
RNF4-213ENST00000509388 CAMPP49913 170 aa10.39□□□□□ -0.75
RNF4-213ENST00000509388 RAB4BP61018 213 aa10.39□□□□□ -0.75
RNF4-213ENST00000509388 UFSP1Q6NVU6 142 aa10.39□□□□□ -0.75
RNF4-213ENST00000509388 MRPL54Q6P161 138 aaKnown RBP10.39□□□□□ -0.75
RNF4-213ENST00000509388 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
RNF4-213ENST00000509388 K7EQD1 137 aa10.38□□□□□ -0.75
RNF4-213ENST00000509388 GYPEP15421 78 aa10.38□□□□□ -0.75
RNF4-213ENST00000509388 MRPL23Q16540 153 aaKnown RBP10.38□□□□□ -0.75
RNF4-213ENST00000509388 VSIG2Q96IQ7 327 aa10.38□□□□□ -0.75
RNF4-213ENST00000509388 APLNQ9ULZ1 77 aa10.38□□□□□ -0.75
RNF4-213ENST00000509388 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
RNF4-213ENST00000509388 KIF25-AS1Q9Y6Z4 181 aa10.38□□□□□ -0.75
RNF4-213ENST00000509388 H7C1H1 209 aa10.37□□□□□ -0.75
RNF4-213ENST00000509388 SRIP30626 198 aa10.37□□□□□ -0.75
RNF4-213ENST00000509388 HBBP68871 147 aa10.37□□□□□ -0.75
RNF4-213ENST00000509388 ATP5L2Q7Z4Y8 100 aa10.37□□□□□ -0.75
RNF4-213ENST00000509388 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
RNF4-213ENST00000509388 Q6ZSN1 163 aa10.36□□□□□ -0.75
RNF4-213ENST00000509388 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
RNF4-213ENST00000509388 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
RNF4-213ENST00000509388 LINC00315P59091 139 aa10.35□□□□□ -0.75
RNF4-213ENST00000509388 DNAH7Q8WXX0 4024 aa10.35□□□□□ -0.75
RNF4-213ENST00000509388 TRAV9-1A0A075B6T8 112 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 A0A096LPF7 62 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 GAGE12JA6NER3 117 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
RNF4-213ENST00000509388 GAGE1Q13065 139 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 GAGE4Q13068 117 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 GAGE5Q13069 117 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 GAGE13Q4V321 117 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 SUMO4Q6EEV6 95 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 NEGR1Q7Z3B1 354 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
RNF4-213ENST00000509388 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
RNF4-213ENST00000509388 CCL18P55774 89 aa10.33□□□□□ -0.76
RNF4-213ENST00000509388 UBE2DNLQ8IWF7 75 aa10.33□□□□□ -0.76
RNF4-213ENST00000509388 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
RNF4-213ENST00000509388 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.33□□□□□ -0.76
RNF4-213ENST00000509388 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
RNF4-213ENST00000509388 TNFRSF18Q9Y5U5 241 aa10.33□□□□□ -0.76
RNF4-213ENST00000509388 A0A1B0GXF2 115 aa10.32□□□□□ -0.76
RNF4-213ENST00000509388 M0QY20 66 aa10.32□□□□□ -0.76
RNF4-213ENST00000509388 P0DMU3 169 aa10.32□□□□□ -0.76
RNF4-213ENST00000509388 FAM231AP0DMU4 169 aa10.32□□□□□ -0.76
RNF4-213ENST00000509388 FAM231CP0DMU5 169 aa10.32□□□□□ -0.76
RNF4-213ENST00000509388 RASL11AQ6T310 242 aa10.32□□□□□ -0.76
RNF4-213ENST00000509388 TRBV7-3A0A075B6L6 115 aa10.31□□□□□ -0.76
RNF4-213ENST00000509388 RAB4AP20338 218 aa10.31□□□□□ -0.76
RNF4-213ENST00000509388 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
RNF4-213ENST00000509388 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
RNF4-213ENST00000509388 FRZBQ92765 325 aa10.31□□□□□ -0.76
RNF4-213ENST00000509388 DNAJC30Q96LL9 226 aa10.31□□□□□ -0.76
RNF4-213ENST00000509388 TRAV26-2A0A0B4J265 109 aa10.3□□□□□ -0.76
RNF4-213ENST00000509388 ATRAIDQ6UW56 229 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms