RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CEBPGP53567 150 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 TCL1AP56279 114 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 PNRC1Q12796 327 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 OCC1Q8TAD7 63 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 C18orf15Q96N68 181 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 EDA2RQ9HAV5 297 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 RETNQ9HD89 108 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 IL36BQ9NZH7 164 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 IGKV3D-20A0A0C4DH25 116 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 IGHV3-16A0A0C4DH30 117 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 A0A0J9YWU9 116 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 A0A1W2PPQ1 181 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 PLAC8L1A1L4L8 177 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 TMEM218A2RU14 115 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 FAM231BA6NCW3 169 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 KRBOX1C9JBD0 128 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 C9JQL5 133 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 M0R2P5 195 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 TYMSP04818 313 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 SFTA3P0C7M3 94 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 HTN1P15515 57 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 AZU1P20160 251 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 S100A4P26447 101 aaKnown RBP3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 ASIPP42127 132 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 OR5I1Q13606 314 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 MUC21Q5SSG8 566 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 FAM222AQ5U5X8 452 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 LINC01551Q86U37 167 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 COMMD7Q86VX2 200 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 C15orf54Q8N8G6 183 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 NHLRC2Q8NBF2 726 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 C11orf72Q8NBR9 251 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 C11orf45Q8TAV5 145 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 RASL10AQ92737 203 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 SEC11CQ9BY50 192 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 OSTCQ9NRP0 149 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 NAGKQ9UJ70 344 aa3.9□□□□□ -1.79
HMGB1P44-201ENST00000508597 A8MWL6 223 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 F2Z2F3 143 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 PPP1R2P9O14990 202 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 GNRH2O43555 120 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 GATCO43716 136 aaKnown RBP3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 SPINK4O60575 86 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 OR5AL1P0C617 328 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 ERVFC1-1P60608 527 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 RPL23P62829 140 aaKnown RBP3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 SLAQ13239 276 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 LINC00612Q8N6U2 182 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 OR2D3Q8NGH3 330 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 FAM210BQ96KR6 192 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 GFRA4Q9GZZ7 299 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 RPP21Q9H633 154 aaKnown RBP3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 NOP10Q9NPE3 64 aaKnown RBP3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 GSN-AS1Q9NRJ2 163 aa3.89□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRGV1A0A0A0MS02 117 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 F8W036 122 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 C3orf84H3BNL1 204 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 K7EN84 100 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 M0R036 132 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 SNAI2O43623 268 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 ATP5G1P05496 136 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 ARMS2P0C7Q2 107 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 RNASE3P12724 160 aaKnown RBP3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 EMP1P54849 157 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 TCTAP57738 103 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 DAD1P61803 113 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 CACNG7P62955 275 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 ADIRFQ15847 76 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 C10orf91Q5T1B1 145 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 Q6ZQT7 251 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 ZFP82Q8N141 532 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 OR10G8Q8NGN5 311 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 ISOC2Q96AB3 205 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 SFRP2Q96HF1 295 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 SCRT2Q9NQ03 307 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 MDFICQ9P1T7 246 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 PHLDA3Q9Y5J5 127 aa3.88□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRGV2A0A075B6R0 118 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 IGHV4-4A0A075B6R2 117 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRAV10A0A0B4J240 114 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRAV4A0A0B4J268 109 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 NUPR2A6NF83 97 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 A8MWV9 139 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 H3BVH4 76 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 DEFB4AO15263 64 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 MT-ND4LP03901 98 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 PRM2P04554 102 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 IGLC6P0CF74 106 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 C12orf74Q32Q52 190 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 ZNF876PQ49A33 203 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 FER1L6-AS1Q8NA97 138 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 MUC7Q8TAX7 377 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 TSKUQ8WUA8 353 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 CNFNQ9BYD5 112 aa3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 RNASE7Q9H1E1 156 aaKnown RBP3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 CELA1Q9UNI1 258 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms