RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ZFP2Q6ZN57 461 aa6.39□□□□□ -1.39
DDX41-209ENST00000508279 DAZAP1Q96EP5 407 aaKnown RBP6.39□□□□□ -1.39
DDX41-209ENST00000508279 MLST8Q9BVC4 326 aa6.39□□□□□ -1.39
DDX41-209ENST00000508279 TPPP3Q9BW30 176 aa6.39□□□□□ -1.39
DDX41-209ENST00000508279 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
DDX41-209ENST00000508279 IGHV3-38A0A0C4DH36 116 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 RHODO00212 210 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 PDE6DO43924 150 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 GZMBP10144 247 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 BCL2P10415 239 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 GNG4P50150 75 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 PIK3CD-AS1Q5SR53 167 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 SPANXN1Q5VSR9 72 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 OR10AG1Q8NH19 301 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 C11orf52Q96A22 123 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 SFRP2Q96HF1 295 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 GTSF1LQ9H1H1 148 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 SCRT2Q9NQ03 307 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 Q9UF83 564 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 VAX2Q9UIW0 290 aa6.38□□□□□ -1.39
DDX41-209ENST00000508279 DNAH10OSP0CZ25 163 aa6.37□□□□□ -1.39
DDX41-209ENST00000508279 ZNF56Q15929 161 aa6.37□□□□□ -1.39
DDX41-209ENST00000508279 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
DDX41-209ENST00000508279 OR2D3Q8NGH3 330 aa6.37□□□□□ -1.39
DDX41-209ENST00000508279 MSRB1Q9NZV6 116 aa6.37□□□□□ -1.39
DDX41-209ENST00000508279 PKD1P98161 4303 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 RBFOX3A6NFN3 312 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 F5H697 171 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 MED14OSP0DP75 135 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 FUSP35637 526 aaKnown RBP eCLIP6.36□□□□□ -1.39
DDX41-209ENST00000508279 CEBPGP53567 150 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 BLOC1S1P78537 153 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 LELP1Q5T871 98 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 NFE4Q86UQ8 179 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 C10orf126Q8N4M7 172 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 Q9HAA7 133 aa6.36□□□□□ -1.39
DDX41-209ENST00000508279 EREGO14944 169 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 PSCAO43653 123 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 IGLV2-8P01709 118 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 P01737 135 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 CXCL1P09341 107 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 SMIM17P0DL12 118 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 BTF3P20290 206 aaKnown RBP6.35□□□□□ -1.39
DDX41-209ENST00000508279 TIRAPP58753 221 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 ERVFC1-1P60608 527 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
DDX41-209ENST00000508279 FER1L6-AS1Q8NA97 138 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
DDX41-209ENST00000508279 TRBV20OR9-2A0A075B6H5 130 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 SNAI2O43623 268 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 MGPP08493 103 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 OR5AL1P0C617 328 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 TAGLN2P37802 199 aaKnown RBP6.34□□□□□ -1.39
DDX41-209ENST00000508279 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 RPS20P60866 119 aaKnown RBP6.34□□□□□ -1.39
DDX41-209ENST00000508279 RPL36AP83881 106 aaKnown RBP6.34□□□□□ -1.39
DDX41-209ENST00000508279 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 Q8N3U1 123 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 RPL36ALQ969Q0 106 aaKnown RBP6.34□□□□□ -1.39
DDX41-209ENST00000508279 BIN3Q9NQY0 253 aa6.34□□□□□ -1.39
DDX41-209ENST00000508279 XKRY2A2RUG3 117 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 C19orf71A6NCJ1 209 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 K7EP13 123 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 LINC00694P0DN24 101 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 RAB4BP61018 213 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 TOR2AQ5JU69 321 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 SMIM12Q96EX1 92 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 SSBP4Q9BWG4 385 aaPredicted RBP6.33□□□□□ -1.4
DDX41-209ENST00000508279 EIF5A2Q9GZV4 153 aaKnown RBP6.33□□□□□ -1.4
DDX41-209ENST00000508279 URGCP-MRPS24S4R325 110 aa6.33□□□□□ -1.4
DDX41-209ENST00000508279 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
DDX41-209ENST00000508279 A0A087WWC5 75 aa6.32□□□□□ -1.4
DDX41-209ENST00000508279 TRBV10-1A0A0K0K1A3 114 aa6.32□□□□□ -1.4
DDX41-209ENST00000508279 NEXN-AS1Q8NBZ9 246 aa6.32□□□□□ -1.4
DDX41-209ENST00000508279 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
DDX41-209ENST00000508279 OCC1Q8TAD7 63 aa6.32□□□□□ -1.4
DDX41-209ENST00000508279 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
DDX41-209ENST00000508279 RNASE7Q9H1E1 156 aaKnown RBP6.32□□□□□ -1.4
DDX41-209ENST00000508279 A0A087WTM6 91 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 IBA57-AS1B1ANH7 110 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 TMEM262E9PQX1 116 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 K7EN84 100 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 IGLC6P0CF74 106 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 UBE2D3P61077 147 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 UBE2D2P62837 147 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 CACNG7P62955 275 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 KCNIP4Q6PIL6 250 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 LYZL1Q6UWQ5 148 aa6.31□□□□□ -1.4
DDX41-209ENST00000508279 DAZ4Q86SG3 579 aaKnown RBP6.31□□□□□ -1.4
DDX41-209ENST00000508279 DAZ3Q9NR90 486 aaKnown RBP6.31□□□□□ -1.4
DDX41-209ENST00000508279 A0A087WX48 190 aa6.3□□□□□ -1.4
DDX41-209ENST00000508279 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.3□□□□□ -1.4
DDX41-209ENST00000508279 RPP21Q9H633 154 aaKnown RBP6.3□□□□□ -1.4
DDX41-209ENST00000508279 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 F2Z2F3 143 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
DDX41-209ENST00000508279 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
DDX41-209ENST00000508279 TRGC1P0CF51 173 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms