RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 OR11H4Q8NGC9 324 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 HIST1H2BAQ96A08 127 aa7.63□□□□□ -1.19
HMGCS1-204ENST00000507293 A0A0D9SG52 128 aa7.62□□□□□ -1.19
HMGCS1-204ENST00000507293 SMLR1H3BR10 107 aa7.62□□□□□ -1.19
HMGCS1-204ENST00000507293 ZNF345Q14585 488 aa7.62□□□□□ -1.19
HMGCS1-204ENST00000507293 Q6ZSA8 131 aa7.62□□□□□ -1.19
HMGCS1-204ENST00000507293 BAALCQ8WXS3 180 aa7.62□□□□□ -1.19
HMGCS1-204ENST00000507293 NKX6-2Q9C056 277 aaPredicted RBP7.62□□□□□ -1.19
HMGCS1-204ENST00000507293 DNAH8Q96JB1 4490 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 A0A087WWL8 130 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 TMSB15BA0A087X1C1 80 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 MAP1LC3B2A6NCE7 125 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 M0R381 172 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 UBE2G1P62253 170 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 FAM162BQ5T6X4 162 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 COX8CQ7Z4L0 72 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 NIT1Q86X76 327 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 TCTE3Q8IZS6 198 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 KCNRGQ8N5I3 272 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 SFRP2Q96HF1 295 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 FMC1Q96HJ9 113 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 DNAJC30Q96LL9 226 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 MAP1LC3BQ9GZQ8 125 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 ZFP30Q9Y2G7 519 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 URGCP-MRPS24S4R325 110 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
HMGCS1-204ENST00000507293 hCG_2014768A0A024R1R8 64 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 KANTRA0A1W2PQU2 76 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 TPT1P13693 172 aaKnown RBP7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 EIF5AP63241 154 aaKnown RBP7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 LINC01620Q4KN68 170 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 AKAP14Q86UN6 197 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 RMI2Q96E14 147 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 KLK12Q9UKR0 248 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 PHLDA3Q9Y5J5 127 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 COX11Q9Y6N1 276 aa7.6□□□□□ -1.19
HMGCS1-204ENST00000507293 IGKV2D-24A0A075B6R9 120 aa7.59□□□□□ -1.19
HMGCS1-204ENST00000507293 TRBV6-1A0A0K0K1D8 114 aa7.59□□□□□ -1.19
HMGCS1-204ENST00000507293 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
HMGCS1-204ENST00000507293 AKR1C3P42330 323 aa7.59□□□□□ -1.19
HMGCS1-204ENST00000507293 ZNF674Q2M3X9 581 aa7.59□□□□□ -1.19
HMGCS1-204ENST00000507293 CST9LP1Q5W188 147 aa7.59□□□□□ -1.19
HMGCS1-204ENST00000507293 ZFP82Q8N141 532 aa7.59□□□□□ -1.19
HMGCS1-204ENST00000507293 MYCBP2O75592 4640 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 J3QL48 77 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 PFDN1O60925 122 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 LTAP01374 205 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 SEC11BP0C7V7 166 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 RPL36AP83881 106 aaKnown RBP7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 RPL36ALQ969Q0 106 aaKnown RBP7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 UBE2WQ96B02 151 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 TCEAL7Q9BRU2 100 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 CYTL1Q9NRR1 136 aa7.58□□□□□ -1.2
HMGCS1-204ENST00000507293 A0A087WX48 190 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 TRBV10-1A0A0K0K1A3 114 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 RBFOX3A6NFN3 312 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 BCL2L11O43521 198 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 FHITP49789 147 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 UBE2D3P61077 147 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 UBE2D2P62837 147 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 KCNIP4Q6PIL6 250 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 TMUB2Q71RG4 321 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 Q8N976 141 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 STOML3Q8TAV4 291 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 CHCHD7Q9BUK0 85 aa7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 ZNF471Q9BX82 626 aaPredicted RBP7.57□□□□□ -1.2
HMGCS1-204ENST00000507293 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
HMGCS1-204ENST00000507293 PAGE4O60829 102 aa7.56□□□□□ -1.2
HMGCS1-204ENST00000507293 ELOBQ15370 118 aa7.56□□□□□ -1.2
HMGCS1-204ENST00000507293 RPL19P84098 196 aaKnown RBP7.55□□□□□ -1.2
HMGCS1-204ENST00000507293 ZNF56Q15929 161 aa7.55□□□□□ -1.2
HMGCS1-204ENST00000507293 ATRAIDQ6UW56 229 aa7.55□□□□□ -1.2
HMGCS1-204ENST00000507293 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
HMGCS1-204ENST00000507293 TRBV6-8A0A0A6YYG3 113 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 A0A1B0GV50 99 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 UMAD1C9J7I0 102 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 TMEM262E9PQX1 116 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 RAB4BP61018 213 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 Q0VG73 95 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 EIF5AL1Q6IS14 154 aaKnown RBP7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 NEXN-AS1Q8NBZ9 246 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 DEFB104AQ8WTQ1 72 aa7.54□□□□□ -1.2
HMGCS1-204ENST00000507293 A0A1B0GVG6 124 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 CRPP02741 224 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 CXCL1P09341 107 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 MPV17L2Q567V2 206 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 ENHOQ6UWT2 76 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 C15orf54Q8N8G6 183 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 FAM213BQ8TBF2 198 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 C1orf43Q9BWL3 253 aa7.53□□□□□ -1.2
HMGCS1-204ENST00000507293 MUC21A0A0G2JKD1 596 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms