RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 RAB5CP51148 216 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 RANP62826 216 aaKnown RBP3.48□□□□□ -1.85
CPNE4-207ENST00000506687 UBE2L3P68036 154 aaKnown RBP3.48□□□□□ -1.85
CPNE4-207ENST00000506687 EBLN2Q6P2I7 272 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 ZNF705AQ6ZN79 300 aaPredicted RBP3.48□□□□□ -1.85
CPNE4-207ENST00000506687 C1orf158Q8N1D5 194 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
CPNE4-207ENST00000506687 ODF3Q96PU9 254 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 KIR2DL4Q99706 377 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 SLC35B3Q9H1N7 401 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 Q9H3A6 140 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 TMPRSS5Q9H3S3 457 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 JPT2Q9H910 190 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 OTORQ9NRC9 128 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 XCL2Q9UBD3 114 aa3.48□□□□□ -1.85
CPNE4-207ENST00000506687 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
CPNE4-207ENST00000506687 TRAV9-2A0A087WT02 112 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 RBAKDNA6NC62 111 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 MAP1LC3B2A6NCE7 125 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 KLLNB2CW77 178 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 GGTLC3B5MD39 225 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 IGKV3-20P01619 116 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 IGLV2-11P01706 119 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 SLC25A5P05141 298 aaKnown RBP3.47□□□□□ -1.85
CPNE4-207ENST00000506687 CRISP2P16562 243 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 G0S2P27469 103 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 FGF8P55075 233 aaPredicted RBP3.47□□□□□ -1.85
CPNE4-207ENST00000506687 FXYD7P58549 80 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 CCL20P78556 96 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 HIST1H1AQ02539 215 aaPredicted RBP3.47□□□□□ -1.85
CPNE4-207ENST00000506687 ERCC8Q13216 396 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 DEFB135Q30KP9 77 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 EIF5AL1Q6IS14 154 aaKnown RBP3.47□□□□□ -1.85
CPNE4-207ENST00000506687 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 ZFAND2AQ8N6M9 145 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 Q8NBF4 154 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 OR4B1Q8NGF8 309 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 RXFP4Q8TDU9 374 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 NTN5Q8WTR8 489 aaPredicted RBP3.47□□□□□ -1.85
CPNE4-207ENST00000506687 TVP23CQ96ET8 276 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 LINC00477Q96M19 166 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 VGLL1Q99990 258 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 MAP1LC3BQ9GZQ8 125 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 TMEM167BQ9NRX6 74 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 DHRS4-AS1Q9P1J3 65 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 ZNF492Q9P255 531 aa3.47□□□□□ -1.85
CPNE4-207ENST00000506687 YTHDF2Q9Y5A9 579 aaKnown RBP3.47□□□□□ -1.85
CPNE4-207ENST00000506687 IGKV2-40A0A087WW87 121 aaPredicted RBP3.46□□□□□ -1.86
CPNE4-207ENST00000506687 M0R2Z0 102 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 ZNF324O75467 553 aaPredicted RBP3.46□□□□□ -1.86
CPNE4-207ENST00000506687 IGKV2D-40P01614 121 aaPredicted RBP3.46□□□□□ -1.86
CPNE4-207ENST00000506687 AMBPP02760 352 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 NMBP08949 121 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 PFN2P35080 140 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 SPINK13Q1W4C9 94 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 FAM74A1Q5RGS3 127 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 SVBPQ8N300 66 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 Q8NAQ8 132 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 C5orf17Q8NAS9 161 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 OR10J6PQ8NGY7 276 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 OR11H2Q8NH07 326 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 FAM213BQ8TBF2 198 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 SFT2D1Q8WV19 159 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 IGF2BP2-AS1Q96M15 143 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 TCEAL7Q9BRU2 100 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 TMEM208Q9BTX3 173 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 NKX6-2Q9C056 277 aaPredicted RBP3.46□□□□□ -1.86
CPNE4-207ENST00000506687 EPDR1Q9UM22 224 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 ARL2-SNX15V9GYD0 113 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 HSPG2P98160 4391 aa3.46□□□□□ -1.86
CPNE4-207ENST00000506687 TRAV12-2A0A075B6T6 113 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 PLAC8L1A1L4L8 177 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 SMIM9A6NGZ8 99 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 SNAPINO95295 136 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 TCRAP04437 139 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 PRM2P04554 102 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 S100A8P05109 93 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 MIFP14174 115 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 CSN1S1P47710 185 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 ZNF138P52744 262 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 CACNG7P62955 275 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 GNG5P63218 68 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 BTN1A1Q13410 526 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 ZNF876PQ49A33 203 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 PRR9Q5T870 116 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 GFI1BQ5VTD9 330 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 ALKAL2Q6UX46 152 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 Q6ZQT7 251 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 MRAP2Q96G30 205 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 LINC00479Q96M42 142 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 BIN3Q9NQY0 253 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 LENEPQ9Y5L5 61 aa3.45□□□□□ -1.86
CPNE4-207ENST00000506687 DNAH11Q96DT5 4516 aa3.44□□□□□ -1.86
CPNE4-207ENST00000506687 TRAV8-1A0A0A6YYK1 113 aa3.44□□□□□ -1.86
CPNE4-207ENST00000506687 A0A0J9YWU9 116 aa3.44□□□□□ -1.86
CPNE4-207ENST00000506687 TRBV6-1A0A0K0K1D8 114 aa3.44□□□□□ -1.86
CPNE4-207ENST00000506687 TINCRA0A1B0GVN0 87 aa3.44□□□□□ -1.86
CPNE4-207ENST00000506687 A0A1B0GVY2 172 aa3.44□□□□□ -1.86
CPNE4-207ENST00000506687 F8W036 122 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms