RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 RPS25P62851 125 aaKnown RBP0.54□□□□□ -2.32
CHD1-203ENST00000505657 VSTM2AQ8TAG5 236 aa0.54□□□□□ -2.32
CHD1-203ENST00000505657 TSKUQ8WUA8 353 aa0.54□□□□□ -2.32
CHD1-203ENST00000505657 PFDN5Q99471 154 aa0.54□□□□□ -2.32
CHD1-203ENST00000505657 PSMG3Q9BT73 122 aaPredicted RBP0.54□□□□□ -2.32
CHD1-203ENST00000505657 NDUFA12Q9UI09 145 aa0.54□□□□□ -2.32
CHD1-203ENST00000505657 NWD2Q9ULI1 1742 aa0.53□□□□□ -2.32
CHD1-203ENST00000505657 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
CHD1-203ENST00000505657 PIRTP0C851 137 aa0.53□□□□□ -2.32
CHD1-203ENST00000505657 DSCR8Q96T75 97 aa0.53□□□□□ -2.32
CHD1-203ENST00000505657 COA4Q9NYJ1 87 aa0.53□□□□□ -2.32
CHD1-203ENST00000505657 ERG28Q9UKR5 140 aa0.53□□□□□ -2.32
CHD1-203ENST00000505657 MYO7AQ13402 2215 aa0.53□□□□□ -2.33
CHD1-203ENST00000505657 CACNA1EQ15878 2313 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 TRAV12-3A0A0B4J271 114 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 CCDC179H3BU77 68 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 SPINK7P58062 85 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 ELOF1P60002 83 aaKnown RBP0.52□□□□□ -2.33
CHD1-203ENST00000505657 SPCS2Q15005 226 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 TCEAL4Q96EI5 215 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 BET1LQ9NYM9 111 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 FRAS1Q86XX4 4008 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 DOCK2Q92608 1830 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 JMJD1CQ15652 2540 aa0.52□□□□□ -2.33
CHD1-203ENST00000505657 TRAV12-2A0A075B6T6 113 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 IL5P05113 134 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 RRAS2P62070 204 aaPredicted RBP0.51□□□□□ -2.33
CHD1-203ENST00000505657 S100A12P80511 92 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 DOCK1Q14185 1865 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 CCDC58Q4VC31 144 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 SPANXN1Q5VSR9 72 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 MYOM3Q5VTT5 1437 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 SLC48A1Q6P1K1 146 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 NDUFA11Q86Y39 141 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 C20orf197Q8N268 126 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 PATJQ8NI35 1801 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 TMEM242Q9NWH2 141 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
CHD1-203ENST00000505657 SIPA1L3O60292 1781 aaPredicted RBP0.5□□□□□ -2.33
CHD1-203ENST00000505657 S100A7L2Q5SY68 101 aa0.5□□□□□ -2.33
CHD1-203ENST00000505657 RPL7L1Q6DKI1 246 aaKnown RBP0.5□□□□□ -2.33
CHD1-203ENST00000505657 PPP1R1CQ8WVI7 109 aa0.5□□□□□ -2.33
CHD1-203ENST00000505657 C10orf82Q8WW14 230 aa0.5□□□□□ -2.33
CHD1-203ENST00000505657 TNCP24821 2201 aa0.5□□□□□ -2.33
CHD1-203ENST00000505657 TCHHQ07283 1943 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 A0A096LNT2 108 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 CCL3L1P16619 93 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 UBE2G1P62253 170 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 EMX2Q04743 252 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 C4orf33Q8N1A6 199 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 KCNRGQ8N5I3 272 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 SPTSSAQ969W0 71 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 SDF2Q99470 211 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 CADP27708 2225 aa0.49□□□□□ -2.33
CHD1-203ENST00000505657 NAV2Q8IVL1 2488 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 TMEM2Q9UHN6 1383 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 A0A087WTM6 91 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 RBAKDNA6NC62 111 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 A6NIN4 97 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 F2Z2F3 143 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 SNCGO76070 127 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 PIPP12273 146 aaPredicted RBP0.48□□□□□ -2.33
CHD1-203ENST00000505657 GUCA1AP43080 201 aaPredicted RBP0.48□□□□□ -2.33
CHD1-203ENST00000505657 SCIMPQ6UWF3 145 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 SPTSSBQ8NFR3 76 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 COX7B2Q8TF08 81 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 TSC22D3Q99576 134 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 TMEM191AQ9H0A3 160 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 RPRMQ9NS64 109 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 CACNA1HO95180 2353 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 GRIN2AQ12879 1464 aa0.48□□□□□ -2.33
CHD1-203ENST00000505657 NDUFA2O43678 99 aa0.47□□□□□ -2.33
CHD1-203ENST00000505657 GNG7O60262 68 aa0.47□□□□□ -2.33
CHD1-203ENST00000505657 HMGN1P05114 100 aa0.47□□□□□ -2.33
CHD1-203ENST00000505657 C9orf116Q5BN46 136 aaPredicted RBP0.47□□□□□ -2.33
CHD1-203ENST00000505657 PAIP2BQ9ULR5 123 aaKnown RBP0.47□□□□□ -2.33
CHD1-203ENST00000505657 KCPQ6ZWJ8 1503 aa0.47□□□□□ -2.33
CHD1-203ENST00000505657 BDP1A6H8Y1 2624 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 FAM25AB3EWG3 89 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 FAM25CB3EWG5 89 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 FAM25GB3EWG6 89 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 NDUFB6O95139 128 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 HIST1H1DP16402 221 aaKnown RBP0.46□□□□□ -2.34
CHD1-203ENST00000505657 SSBP1Q04837 148 aaKnown RBP0.46□□□□□ -2.34
CHD1-203ENST00000505657 FAM74A4Q5TZK3 123 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 PDCD10Q9BUL8 212 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 PLAC8Q9NZF1 115 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 V9GYV3 84 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 PRDM2Q13029 1718 aa0.46□□□□□ -2.34
CHD1-203ENST00000505657 IBTKQ9P2D0 1353 aaPredicted RBP0.45□□□□□ -2.34
CHD1-203ENST00000505657 ARAP2Q8WZ64 1704 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 TRBV7-1A0A0A6YYK4 115 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 PRH1P02810 166 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 PI4KAP42356 2102 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 ARL11Q969Q4 196 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 DPH3Q96FX2 82 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 CCDC167Q9P0B6 97 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 SSC5DA1L4H1 1573 aa0.45□□□□□ -2.34
CHD1-203ENST00000505657 IFT172Q9UG01 1749 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 ACYP2P14621 99 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 456.3 ms