RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 C14orf178Q8N769 122 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-220ENST00000505307 SFRP2Q96HF1 295 aa13.27□□□□□ -0.29
UBE2D3-220ENST00000505307 ARPC5O15511 151 aa13.26□□□□□ -0.29
UBE2D3-220ENST00000505307 LTAP01374 205 aa13.26□□□□□ -0.29
UBE2D3-220ENST00000505307 LINC01559Q495D7 138 aa13.26□□□□□ -0.29
UBE2D3-220ENST00000505307 CST9LP1Q5W188 147 aa13.26□□□□□ -0.29
UBE2D3-220ENST00000505307 RMI2Q96E14 147 aa13.26□□□□□ -0.29
UBE2D3-220ENST00000505307 CYTL1Q9NRR1 136 aa13.26□□□□□ -0.29
UBE2D3-220ENST00000505307 URGCP-MRPS24S4R325 110 aa13.26□□□□□ -0.29
UBE2D3-220ENST00000505307 TRBV10-1A0A0K0K1A3 114 aa13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 GRIFINA4D1Z8 144 aa13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 G3V3Q6 166 aa13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 HAMPP81172 84 aa13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 FAM74A4Q5TZK3 123 aa13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 DAZ4Q86SG3 579 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 ZFP82Q8N141 532 aa13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 DAZ3Q9NR90 486 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 Q9UF83 564 aa13.25□□□□□ -0.29
UBE2D3-220ENST00000505307 S100A9P06702 114 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-220ENST00000505307 AKR1C3P42330 323 aa13.24□□□□□ -0.29
UBE2D3-220ENST00000505307 RGS21Q2M5E4 152 aa13.24□□□□□ -0.29
UBE2D3-220ENST00000505307 Q8N3U1 123 aa13.24□□□□□ -0.29
UBE2D3-220ENST00000505307 DMBT1Q9UGM3 2413 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-220ENST00000505307 CHCHD7Q9BUK0 85 aa13.23□□□□□ -0.29
UBE2D3-220ENST00000505307 A0A087WWL8 130 aa13.22□□□□□ -0.29
UBE2D3-220ENST00000505307 M0R381 172 aa13.22□□□□□ -0.29
UBE2D3-220ENST00000505307 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-220ENST00000505307 ELOBQ15370 118 aa13.22□□□□□ -0.29
UBE2D3-220ENST00000505307 NIT1Q86X76 327 aa13.22□□□□□ -0.29
UBE2D3-220ENST00000505307 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-220ENST00000505307 UMAD1C9J7I0 102 aa13.21□□□□□ -0.29
UBE2D3-220ENST00000505307 ZNF345Q14585 488 aa13.21□□□□□ -0.29
UBE2D3-220ENST00000505307 KCNIP4Q6PIL6 250 aa13.21□□□□□ -0.29
UBE2D3-220ENST00000505307 TMSB15BA0A087X1C1 80 aa13.2□□□□□ -0.3
UBE2D3-220ENST00000505307 PAGE4O60829 102 aa13.2□□□□□ -0.3
UBE2D3-220ENST00000505307 WFDC2Q14508 124 aa13.2□□□□□ -0.3
UBE2D3-220ENST00000505307 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
UBE2D3-220ENST00000505307 MBD3L1Q8WWY6 194 aa13.2□□□□□ -0.3
UBE2D3-220ENST00000505307 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
UBE2D3-220ENST00000505307 VPS13BQ7Z7G8 4022 aa13.2□□□□□ -0.3
UBE2D3-220ENST00000505307 SRRM2Q9UQ35 2752 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-220ENST00000505307 TRBV7-3A0A075B6L6 115 aa13.19□□□□□ -0.3
UBE2D3-220ENST00000505307 A0A087WX48 190 aa13.19□□□□□ -0.3
UBE2D3-220ENST00000505307 CXCL1P09341 107 aa13.19□□□□□ -0.3
UBE2D3-220ENST00000505307 Q8N976 141 aa13.19□□□□□ -0.3
UBE2D3-220ENST00000505307 SFT2D1Q8WV19 159 aa13.19□□□□□ -0.3
UBE2D3-220ENST00000505307 UBE2D3P61077 147 aa13.18□□□□□ -0.3
UBE2D3-220ENST00000505307 UBE2D2P62837 147 aa13.18□□□□□ -0.3
UBE2D3-220ENST00000505307 Q6ZSA8 131 aa13.18□□□□□ -0.3
UBE2D3-220ENST00000505307 OR10G8Q8NGN5 311 aa13.18□□□□□ -0.3
UBE2D3-220ENST00000505307 LECT2O14960 151 aa13.17□□□□□ -0.3
UBE2D3-220ENST00000505307 PFDN1O60925 122 aa13.17□□□□□ -0.3
UBE2D3-220ENST00000505307 RAB4BP61018 213 aa13.17□□□□□ -0.3
UBE2D3-220ENST00000505307 Q0VG73 95 aa13.17□□□□□ -0.3
UBE2D3-220ENST00000505307 BAALCQ8WXS3 180 aa13.17□□□□□ -0.3
UBE2D3-220ENST00000505307 KLK12Q9UKR0 248 aa13.17□□□□□ -0.3
UBE2D3-220ENST00000505307 IGKV2D-24A0A075B6R9 120 aa13.16□□□□□ -0.3
UBE2D3-220ENST00000505307 HMSDA8MTL9 139 aa13.16□□□□□ -0.3
UBE2D3-220ENST00000505307 BAGE2Q86Y30 109 aa13.16□□□□□ -0.3
UBE2D3-220ENST00000505307 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-220ENST00000505307 FAM213BQ8TBF2 198 aa13.16□□□□□ -0.3
UBE2D3-220ENST00000505307 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-220ENST00000505307 FLG2Q5D862 2391 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 A0A0D9SG52 128 aa13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 PLA2G1BP04054 148 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 EIF5AP63241 154 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 ATRAIDQ6UW56 229 aa13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 UBE2WQ96B02 151 aa13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 MLST8Q9BVC4 326 aa13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 MYCBP2O75592 4640 aa13.15□□□□□ -0.3
UBE2D3-220ENST00000505307 PKIAP61925 76 aa13.14□□□□□ -0.31
UBE2D3-220ENST00000505307 SSBP4Q9BWG4 385 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-220ENST00000505307 TRBV6-8A0A0A6YYG3 113 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 SCO2A0A1W2PP80 73 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 KANTRA0A1W2PQU2 76 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 RBFOX3A6NFN3 312 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 SNAI2O43623 268 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 OR5AL1P0C617 328 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 PRR27Q6MZM9 219 aa13.13□□□□□ -0.31
UBE2D3-220ENST00000505307 TMEM262E9PQX1 116 aa13.12□□□□□ -0.31
UBE2D3-220ENST00000505307 H2AFB1P0C5Y9 115 aa13.12□□□□□ -0.31
UBE2D3-220ENST00000505307 ZNF56Q15929 161 aa13.12□□□□□ -0.31
UBE2D3-220ENST00000505307 OR10AG1Q8NH19 301 aa13.12□□□□□ -0.31
UBE2D3-220ENST00000505307 BCL2L11O43521 198 aa13.11□□□□□ -0.31
UBE2D3-220ENST00000505307 RPL19P84098 196 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-220ENST00000505307 C14orf177Q52M58 125 aa13.11□□□□□ -0.31
UBE2D3-220ENST00000505307 TMEM97Q5BJF2 176 aa13.11□□□□□ -0.31
UBE2D3-220ENST00000505307 SPANXN1Q5VSR9 72 aa13.11□□□□□ -0.31
UBE2D3-220ENST00000505307 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
UBE2D3-220ENST00000505307 NEXN-AS1Q8NBZ9 246 aa13.11□□□□□ -0.31
UBE2D3-220ENST00000505307 A0A1B0GV50 99 aa13.1□□□□□ -0.31
UBE2D3-220ENST00000505307 C1orf43Q9BWL3 253 aa13.1□□□□□ -0.31
UBE2D3-220ENST00000505307 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
UBE2D3-220ENST00000505307 DNAJC30Q96LL9 226 aa13.09□□□□□ -0.31
UBE2D3-220ENST00000505307 DNAH8Q96JB1 4490 aa13.08□□□□□ -0.32
UBE2D3-220ENST00000505307 F5H697 171 aa13.08□□□□□ -0.32
UBE2D3-220ENST00000505307 CRPP02741 224 aa13.08□□□□□ -0.32
UBE2D3-220ENST00000505307 SMIM17P0DL12 118 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms