RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 TIRAPP58753 221 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 LINC00315P59091 139 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 TMEM183BQ1AE95 376 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 Q6AWC8 147 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 Q6ZRN7 208 aaPredicted RBP3.31□□□□□ -1.88
CDH9-203ENST00000505045 GOLT1AQ6ZVE7 132 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 TMEM183AQ8IXX5 376 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 TMEM75Q8N9X5 138 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 ZNF479Q96JC4 524 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 C2orf88Q9BSF0 95 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 SMDT1Q9H4I9 107 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 NAGKQ9UJ70 344 aa3.31□□□□□ -1.88
CDH9-203ENST00000505045 MRPS16Q9Y3D3 137 aaKnown RBP3.31□□□□□ -1.88
CDH9-203ENST00000505045 BORCS7-ASMTA0A0B4J1R7 106 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 LOC100131303A0A0U1RQF7 123 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 RBAKDNA6NC62 111 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 PGPA6NDG6 321 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 UMAD1C9J7I0 102 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 H3BNG1 76 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 IFNA5P01569 189 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 IGLV2-11P01706 119 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 TYMSP04818 313 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 SEC11BP0C7V7 166 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 RPS10P46783 165 aaKnown RBP3.3□□□□□ -1.88
CDH9-203ENST00000505045 CRYBA4P53673 196 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 ZNF415Q09FC8 603 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 PYY3Q5JQD4 70 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 SOHLH1Q5JUK2 328 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 LYPD1Q8N2G4 141 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 OR10G4Q8NGN3 311 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 OR10G9Q8NGN4 311 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 OR10G7Q8NGN6 311 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 SCGB1C1Q8TD33 95 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 ISOC2Q96AB3 205 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 OTORQ9NRC9 128 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 HERC1Q15751 4861 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 A0A087WWC5 75 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 TRBV7-9A0A0J9YWB2 115 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 IFITM10A6NMD0 228 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 TSTD3H0UI37 97 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 GNRH2O43555 120 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 NXPH4O95158 308 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 STAG3L2P0CL84 134 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 STAG3L3P0CL85 134 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 DNAH10OSP0CZ25 163 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 DDTP30046 118 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 CSN1S1P47710 185 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 CDC34P49427 236 aaPredicted RBP3.3□□□□□ -1.88
CDH9-203ENST00000505045 TAS2R45P59539 299 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 TWIST1Q15672 202 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 ZNF674Q2M3X9 581 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 ACOT6Q3I5F7 207 aaPredicted RBP3.3□□□□□ -1.88
CDH9-203ENST00000505045 TDRG1Q3Y452 100 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 DPPA3Q6W0C5 159 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 PQLC2Q6ZP29 291 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 SPATA12Q7Z6I5 190 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 WFDC10BQ8IUB3 73 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 OR10D4PQ8NGN7 298 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 OR2G3Q8NGZ4 309 aa3.3□□□□□ -1.88
CDH9-203ENST00000505045 EIF5A2Q9GZV4 153 aaKnown RBP3.3□□□□□ -1.88
CDH9-203ENST00000505045 A0A1W2PPV4 95 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 K7EQD1 137 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 TCAPO15273 167 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 TCRAP04437 139 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 GCHFRP30047 84 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 HIST3H2BBQ8N257 126 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 NRACQ8N912 160 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 RASL10AQ92737 203 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 PSMG3Q9BT73 122 aaPredicted RBP3.29□□□□□ -1.88
CDH9-203ENST00000505045 PRO0255Q9UI72 69 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 HHLA3Q9XRX5 114 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
CDH9-203ENST00000505045 SRRM2Q9UQ35 2752 aaKnown RBP3.29□□□□□ -1.88
CDH9-203ENST00000505045 PPP1R2P9O14990 202 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 SIVA1O15304 175 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 SRP19P09132 144 aaKnown RBP3.28□□□□□ -1.88
CDH9-203ENST00000505045 RAB4AP20338 218 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 FGF8P55075 233 aaPredicted RBP3.28□□□□□ -1.88
CDH9-203ENST00000505045 SUMO2P61956 95 aaKnown RBP3.28□□□□□ -1.88
CDH9-203ENST00000505045 TTC32Q5I0X7 151 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 C10orf25Q5T742 122 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 LYPD5Q6UWN5 251 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 FAM159AQ6UWV7 190 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 PRSS3P2Q8NHM4 247 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 CMTM2Q8TAZ6 248 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 PRO1933Q9H354 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 LENEPQ9Y5L5 61 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 TRAV4A0A0B4J268 109 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 TRAV34A0A0B4J273 112 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 TRGV4A0A0C4DH28 118 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 RBFOX3A6NFN3 312 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 ZNF727A8MUV8 499 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 B4DEV8 164 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BKO60814 126 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 GCGP01275 180 aa3.28□□□□□ -1.88
CDH9-203ENST00000505045 HIST1H2BJP06899 126 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms