RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 ZNF826PQ6ZT77 177 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 FP248Q71RG6 208 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 COMMD6Q7Z4G1 85 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 LINC00301Q8NCQ3 95 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 C10orf105Q8TEF2 133 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 DYNLRB2Q8TF09 96 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 MUCL1Q96DR8 90 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 REG4Q9BYZ8 158 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 CHD3Q12873 2000 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 ZFC3H1O60293 1989 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 ALPK3Q96L96 1907 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 CASZ1Q86V15 1759 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 COL4A1P02462 1669 aa1.77□□□□□ -2.13
TRAPPC13-205ENST00000504243 TNRC6AQ8NDV7 1962 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 MYLKQ15746 1914 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 LOC107984156A0A0G2JMH3 177 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 KANTRA0A1W2PQU2 76 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 RBAKDNA6NC62 111 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 H3BRM9 83 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 IGKCP01834 107 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 MGST1P10620 155 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 SLC25A6P12236 298 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 FAUP35544 74 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 SPRNQ5BIV9 151 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 C2orf82Q6UX34 121 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 CASC2Q6XLA1 102 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 Q6ZSA8 131 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 SLC25A26Q70HW3 274 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 ARL17AQ8IVW1 177 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 Q8IYB0 196 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 C9orf163Q8N9P6 203 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 TMEM254Q8TBM7 123 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 TMEM141Q96I45 108 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 DSCR8Q96T75 97 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 SPHKAPQ2M3C7 1700 aa1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 USP9XQ93008 2570 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-205ENST00000504243 FANCAO15360 1455 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 C10orf71Q711Q0 1435 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 ANKARQ7Z5J8 1434 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 NUMA1Q14980 2115 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 COL4A5P29400 1685 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 TRBV7-7A0A0K0K1E9 115 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 A6NN06 94 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 DSCR4P56555 118 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 Q1T7F1 81 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 MPV17LQ2QL34 196 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 ARPINQ7Z6K5 226 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 Q8N814 137 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 PPDPFLQ8WWR9 84 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 TSLPQ969D9 159 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 TRGV9Q99603 122 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 MRPL35Q9NZE8 188 aaKnown RBP1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 CACFD1Q9UGQ2 172 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 PSME4Q14997 1843 aa1.75□□□□□ -2.13
TRAPPC13-205ENST00000504243 ARAP2Q8WZ64 1704 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 ZNF462Q96JM2 2506 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 MYH1P12882 1939 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 A0A087WSZ3 146 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 B4DSR2 109 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 E7EUB6 86 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 ERC2-IT1O76042 136 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 NMBP08949 121 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 ADCYAP1P18509 176 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 UBE2G1P62253 170 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 Q8N8P6 123 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 OR10AG1Q8NH19 301 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 FAM213BQ8TBF2 198 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 CYP4F30PQ9H0H9 118 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 LHFPL6Q9Y693 200 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 SPCS1Q9Y6A9 102 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 SCN3AQ9NY46 2000 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 NAV2Q8IVL1 2488 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 ABCC5O15440 1437 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 CASKIN1Q8WXD9 1431 aa1.74□□□□□ -2.13
TRAPPC13-205ENST00000504243 ARHGEF12Q9NZN5 1544 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 IGLV1-51P01701 117 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 CCKP06307 115 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 ROMO1P60602 79 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 GNG11P61952 73 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 RBM3P98179 157 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 PMCHL1Q16048 86 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 LINC00269Q8N2A0 174 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 SERP2Q8N6R1 65 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 NDUFA12Q9UI09 145 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 SUPT6HQ7KZ85 1726 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 MARF1Q9Y4F3 1742 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 TEP1Q99973 2627 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 PXDNQ92626 1479 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 HELZP42694 1942 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 USP54Q70EL1 1684 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 DOCK1Q14185 1865 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 PLXNA4Q9HCM2 1894 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 ANKRD11Q6UB99 2663 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 MICAL3Q7RTP6 2002 aa1.73□□□□□ -2.13
TRAPPC13-205ENST00000504243 THOC2Q8NI27 1593 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-205ENST00000504243 SETBP1Q9Y6X0 1596 aa1.72□□□□□ -2.13
TRAPPC13-205ENST00000504243 PPLO60437 1756 aa1.72□□□□□ -2.13
TRAPPC13-205ENST00000504243 IGKV2D-26A0A0A0MRZ7 120 aa1.72□□□□□ -2.13
TRAPPC13-205ENST00000504243 TRBV10-3A0A0K0K1G6 114 aa1.72□□□□□ -2.13
TRAPPC13-205ENST00000504243 TCRBV4S1A1TA0A5B7 111 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms