RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RBMY1FQ15415 496 aaKnown RBP15.73■□□□□ 0.11
UBE2D3-216ENST00000503742 BATFQ16520 125 aa15.73■□□□□ 0.11
UBE2D3-216ENST00000503742 FXYD7P58549 80 aa15.73■□□□□ 0.11
UBE2D3-216ENST00000503742 WNK1Q9H4A3 2382 aa15.72■□□□□ 0.11
UBE2D3-216ENST00000503742 LINC00315P59091 139 aa15.72■□□□□ 0.11
UBE2D3-216ENST00000503742 INAFM1C9JVW0 142 aa15.71■□□□□ 0.11
UBE2D3-216ENST00000503742 ODF3L2Q3SX64 289 aa15.71■□□□□ 0.11
UBE2D3-216ENST00000503742 RASL10AQ92737 203 aa15.71■□□□□ 0.11
UBE2D3-216ENST00000503742 LINC01545Q5VT33 79 aa15.71■□□□□ 0.1
UBE2D3-216ENST00000503742 SETD2Q9BYW2 2564 aaPredicted RBP15.7■□□□□ 0.1
UBE2D3-216ENST00000503742 MAJINQ3KP22 176 aa15.7■□□□□ 0.1
UBE2D3-216ENST00000503742 CLUHP3Q96NS8 147 aa15.7■□□□□ 0.1
UBE2D3-216ENST00000503742 FCER1GP30273 86 aa15.69■□□□□ 0.1
UBE2D3-216ENST00000503742 TRGV11A0A075B6L2 103 aa15.69■□□□□ 0.1
UBE2D3-216ENST00000503742 MGPP08493 103 aa15.69■□□□□ 0.1
UBE2D3-216ENST00000503742 JPT2Q9H910 190 aa15.69■□□□□ 0.1
UBE2D3-216ENST00000503742 KRTAP10-3P60369 221 aa15.68■□□□□ 0.1
UBE2D3-216ENST00000503742 C20orf78Q9BR46 151 aa15.68■□□□□ 0.1
UBE2D3-216ENST00000503742 SETXQ7Z333 2677 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-216ENST00000503742 SMIM17P0DL12 118 aa15.67■□□□□ 0.1
UBE2D3-216ENST00000503742 NSUN5P1Q3KNT7 163 aa15.67■□□□□ 0.1
UBE2D3-216ENST00000503742 RPL39LQ96EH5 51 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-216ENST00000503742 MCRIP2Q9BUT9 160 aaKnown RBP15.67■□□□□ 0.1
UBE2D3-216ENST00000503742 SMIM2Q9BVW6 85 aa15.67■□□□□ 0.1
UBE2D3-216ENST00000503742 ST20Q9HBF5 79 aa15.67■□□□□ 0.1
UBE2D3-216ENST00000503742 H0Y8G0 127 aa15.66■□□□□ 0.1
UBE2D3-216ENST00000503742 NPSP0C0P6 89 aa15.66■□□□□ 0.1
UBE2D3-216ENST00000503742 SUMO2P61956 95 aaKnown RBP15.66■□□□□ 0.1
UBE2D3-216ENST00000503742 SYT8Q8NBV8 401 aa15.66■□□□□ 0.1
UBE2D3-216ENST00000503742 CBY3A6NI87 242 aa15.66■□□□□ 0.1
UBE2D3-216ENST00000503742 IGLL1P15814 213 aa15.66■□□□□ 0.1
UBE2D3-216ENST00000503742 IFI27L1Q96BM0 104 aa15.66■□□□□ 0.1
UBE2D3-216ENST00000503742 PPP1R17O96001 155 aa15.65■□□□□ 0.1
UBE2D3-216ENST00000503742 LAGE3Q14657 143 aa15.65■□□□□ 0.1
UBE2D3-216ENST00000503742 STPG4Q8N801 248 aa15.65■□□□□ 0.1
UBE2D3-216ENST00000503742 ORAOV1Q8WV07 137 aa15.65■□□□□ 0.1
UBE2D3-216ENST00000503742 TMEM158Q8WZ71 300 aa15.65■□□□□ 0.1
UBE2D3-216ENST00000503742 SAP30O75446 220 aa15.64■□□□□ 0.09
UBE2D3-216ENST00000503742 IGLV1-51P01701 117 aa15.64■□□□□ 0.09
UBE2D3-216ENST00000503742 NDUFA11Q86Y39 141 aa15.64■□□□□ 0.09
UBE2D3-216ENST00000503742 A0A087WWL8 130 aa15.64■□□□□ 0.09
UBE2D3-216ENST00000503742 OR11H12B2RN74 326 aa15.64■□□□□ 0.09
UBE2D3-216ENST00000503742 LINC00467Q9BRT7 94 aa15.64■□□□□ 0.09
UBE2D3-216ENST00000503742 LGALS9BQ3B8N2 356 aa15.63■□□□□ 0.09
UBE2D3-216ENST00000503742 LGALS9CQ6DKI2 356 aa15.63■□□□□ 0.09
UBE2D3-216ENST00000503742 NSD1Q96L73 2696 aaPredicted RBP15.63■□□□□ 0.09
UBE2D3-216ENST00000503742 CRYGDP07320 174 aa15.62■□□□□ 0.09
UBE2D3-216ENST00000503742 SUMO4Q6EEV6 95 aa15.62■□□□□ 0.09
UBE2D3-216ENST00000503742 PMCHL2Q9BQD1 86 aa15.62■□□□□ 0.09
UBE2D3-216ENST00000503742 TRPT1Q86TN4 253 aaKnown RBP15.62■□□□□ 0.09
UBE2D3-216ENST00000503742 hDV102S1A0JD36 115 aa15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 K7EMI3 77 aa15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 INSP01308 110 aa15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 RPL32P62910 135 aaKnown RBP15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 ZNF876PQ49A33 203 aa15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 STHQ8IWL8 128 aa15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 FN1P02751 2386 aaKnown RBP15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 HIVEP1P15822 2718 aa15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 CMC4P56277 68 aaPredicted RBP15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 C18orf15Q96N68 181 aa15.6■□□□□ 0.09
UBE2D3-216ENST00000503742 HSBP1L1C9JCN9 74 aa15.59■□□□□ 0.09
UBE2D3-216ENST00000503742 HTN1P15515 57 aa15.58■□□□□ 0.09
UBE2D3-216ENST00000503742 FAM110AQ9BQ89 295 aa15.58■□□□□ 0.09
UBE2D3-216ENST00000503742 CRLF1O75462 422 aa15.58■□□□□ 0.08
UBE2D3-216ENST00000503742 PRM2P04554 102 aa15.58■□□□□ 0.08
UBE2D3-216ENST00000503742 BEAN1Q3B7T3 259 aa15.58■□□□□ 0.08
UBE2D3-216ENST00000503742 ORMDL2Q53FV1 153 aa15.58■□□□□ 0.08
UBE2D3-216ENST00000503742 FAM74A4Q5TZK3 123 aa15.58■□□□□ 0.08
UBE2D3-216ENST00000503742 F5H697 171 aa15.57■□□□□ 0.08
UBE2D3-216ENST00000503742 HINT1P49773 126 aaPredicted RBP15.57■□□□□ 0.08
UBE2D3-216ENST00000503742 LINC01587Q99440 93 aa15.57■□□□□ 0.08
UBE2D3-216ENST00000503742 CSTL1Q9H114 145 aa15.57■□□□□ 0.08
UBE2D3-216ENST00000503742 POLR2KP53803 58 aaKnown RBP15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 PTH2Q96A98 100 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 COX11Q9Y6N1 276 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 TRBV6-5A0A0K0K1A5 114 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 ATP5LO75964 103 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 NUDT3O95989 172 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 ZNF415Q09FC8 603 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 PIK3CD-AS1Q5SR53 167 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 C11orf72Q8NBR9 251 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 C19orf73Q9NVV2 129 aa15.56■□□□□ 0.08
UBE2D3-216ENST00000503742 M0QY20 66 aa15.55■□□□□ 0.08
UBE2D3-216ENST00000503742 LINC00482Q8N8I6 264 aa15.55■□□□□ 0.08
UBE2D3-216ENST00000503742 XCL2Q9UBD3 114 aa15.55■□□□□ 0.08
UBE2D3-216ENST00000503742 C2CD3Q4AC94 2353 aa15.55■□□□□ 0.08
UBE2D3-216ENST00000503742 M0R2P5 195 aa15.55■□□□□ 0.08
UBE2D3-216ENST00000503742 ZNF56Q15929 161 aa15.54■□□□□ 0.08
UBE2D3-216ENST00000503742 MORN3Q6PF18 240 aaPredicted RBP15.54■□□□□ 0.08
UBE2D3-216ENST00000503742 SLC25A34Q6PIV7 304 aa15.54■□□□□ 0.08
UBE2D3-216ENST00000503742 C1orf158Q8N1D5 194 aa15.54■□□□□ 0.08
UBE2D3-216ENST00000503742 NIPBLQ6KC79 2804 aaeCLIP15.54■□□□□ 0.08
UBE2D3-216ENST00000503742 TOMM6Q96B49 74 aa15.53■□□□□ 0.08
UBE2D3-216ENST00000503742 PF4P02776 101 aa15.53■□□□□ 0.08
UBE2D3-216ENST00000503742 ODF1Q14990 250 aa15.53■□□□□ 0.08
UBE2D3-216ENST00000503742 DKK2Q9UBU2 259 aa15.53■□□□□ 0.08
UBE2D3-216ENST00000503742 ZMAT4Q9H898 229 aa15.52■□□□□ 0.07
UBE2D3-216ENST00000503742 VCYO14598 125 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 PRSS1P07477 247 aa15.51■□□□□ 0.07
UBE2D3-216ENST00000503742 UFSP1Q6NVU6 142 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms