RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZNF415Q09FC8 603 aa16.08■□□□□ 0.16
PTPN13-205ENST00000502971 C20orf78Q9BR46 151 aa16.08■□□□□ 0.16
PTPN13-205ENST00000502971 XCL2Q9UBD3 114 aa16.08■□□□□ 0.16
PTPN13-205ENST00000502971 IGLV2-18A0A075B6J9 118 aa16.07■□□□□ 0.16
PTPN13-205ENST00000502971 PKIAP61925 76 aa16.07■□□□□ 0.16
PTPN13-205ENST00000502971 C9orf66Q5T8R8 295 aa16.07■□□□□ 0.16
PTPN13-205ENST00000502971 RASL10AQ92737 203 aa16.07■□□□□ 0.16
PTPN13-205ENST00000502971 A0A096LNJ9 63 aa16.06■□□□□ 0.16
PTPN13-205ENST00000502971 HBDP02042 147 aa16.06■□□□□ 0.16
PTPN13-205ENST00000502971 ZNF876PQ49A33 203 aa16.06■□□□□ 0.16
PTPN13-205ENST00000502971 PTH2Q96A98 100 aa16.06■□□□□ 0.16
PTPN13-205ENST00000502971 JPT2Q9H910 190 aa16.06■□□□□ 0.16
PTPN13-205ENST00000502971 PIK3CD-AS1Q5SR53 167 aa16.05■□□□□ 0.16
PTPN13-205ENST00000502971 MAP1LC3CQ9BXW4 147 aa16.05■□□□□ 0.16
PTPN13-205ENST00000502971 LINC00173Q6ZV60 143 aa16.05■□□□□ 0.16
PTPN13-205ENST00000502971 ZNF664Q8N3J9 261 aa16.05■□□□□ 0.16
PTPN13-205ENST00000502971 ZNF747Q9BV97 191 aa16.05■□□□□ 0.16
PTPN13-205ENST00000502971 A0A087WWL8 130 aa16.04■□□□□ 0.16
PTPN13-205ENST00000502971 TSTD3H0UI37 97 aa16.04■□□□□ 0.16
PTPN13-205ENST00000502971 SYS1-DBNDD2H3BUS1 97 aa16.04■□□□□ 0.16
PTPN13-205ENST00000502971 FBN1P35555 2871 aaKnown RBP16.04■□□□□ 0.16
PTPN13-205ENST00000502971 M0R2P5 195 aa16.03■□□□□ 0.16
PTPN13-205ENST00000502971 CRYGDP07320 174 aa16.03■□□□□ 0.16
PTPN13-205ENST00000502971 SUMO2P61956 95 aaKnown RBP16.03■□□□□ 0.16
PTPN13-205ENST00000502971 C1orf158Q8N1D5 194 aa16.03■□□□□ 0.16
PTPN13-205ENST00000502971 TMEM208Q9BTX3 173 aa16.03■□□□□ 0.16
PTPN13-205ENST00000502971 SMIM2Q9BVW6 85 aa16.03■□□□□ 0.16
PTPN13-205ENST00000502971 FCER1GP30273 86 aa16.02■□□□□ 0.16
PTPN13-205ENST00000502971 MORN3Q6PF18 240 aaPredicted RBP16.02■□□□□ 0.16
PTPN13-205ENST00000502971 C11orf72Q8NBR9 251 aa16.02■□□□□ 0.16
PTPN13-205ENST00000502971 SPXQ9BT56 116 aa16.02■□□□□ 0.16
PTPN13-205ENST00000502971 SUMO4Q6EEV6 95 aa16.02■□□□□ 0.15
PTPN13-205ENST00000502971 PET117Q6UWS5 81 aa16.02■□□□□ 0.15
PTPN13-205ENST00000502971 C12orf54Q6X4T0 127 aa16.02■□□□□ 0.15
PTPN13-205ENST00000502971 RPL39LQ96EH5 51 aaKnown RBP16.02■□□□□ 0.15
PTPN13-205ENST00000502971 WFDC10AQ9H1F0 79 aa16.02■□□□□ 0.15
PTPN13-205ENST00000502971 TENM1Q9UKZ4 2725 aa16.01■□□□□ 0.15
PTPN13-205ENST00000502971 F5H697 171 aa16.01■□□□□ 0.15
PTPN13-205ENST00000502971 C3orf56Q8N813 242 aa16.01■□□□□ 0.15
PTPN13-205ENST00000502971 C20orf202A1L168 122 aa16■□□□□ 0.15
PTPN13-205ENST00000502971 K7EMI3 77 aa16■□□□□ 0.15
PTPN13-205ENST00000502971 PRM2P04554 102 aa16■□□□□ 0.15
PTPN13-205ENST00000502971 LAGE3Q14657 143 aa16■□□□□ 0.15
PTPN13-205ENST00000502971 FAM74A4Q5TZK3 123 aa16■□□□□ 0.15
PTPN13-205ENST00000502971 MCRIP2Q9BUT9 160 aaKnown RBP16■□□□□ 0.15
PTPN13-205ENST00000502971 VAMP8Q9BV40 100 aa16■□□□□ 0.15
PTPN13-205ENST00000502971 C1QTNF4Q9BXJ3 329 aa16■□□□□ 0.15
PTPN13-205ENST00000502971 RPL32P62910 135 aaKnown RBP15.99■□□□□ 0.15
PTPN13-205ENST00000502971 SHISA2Q6UWI4 295 aa15.99■□□□□ 0.15
PTPN13-205ENST00000502971 PRO1933Q9H354 126 aa15.99■□□□□ 0.15
PTPN13-205ENST00000502971 GIG44P09565 113 aaPredicted RBP15.99■□□□□ 0.15
PTPN13-205ENST00000502971 RIPPLY3P57055 190 aa15.99■□□□□ 0.15
PTPN13-205ENST00000502971 SPATA12Q7Z6I5 190 aa15.99■□□□□ 0.15
PTPN13-205ENST00000502971 GTSCR1Q86UQ5 136 aa15.99■□□□□ 0.15
PTPN13-205ENST00000502971 GOLT1BQ9Y3E0 138 aa15.99■□□□□ 0.15
PTPN13-205ENST00000502971 A8MWV9 139 aa15.98■□□□□ 0.15
PTPN13-205ENST00000502971 RPL35AP18077 110 aaKnown RBP15.98■□□□□ 0.15
PTPN13-205ENST00000502971 ZNF56Q15929 161 aa15.98■□□□□ 0.15
PTPN13-205ENST00000502971 SPATA3Q8NHX4 192 aa15.97■□□□□ 0.15
PTPN13-205ENST00000502971 NDUFAF3Q9BU61 184 aa15.97■□□□□ 0.15
PTPN13-205ENST00000502971 ST20Q9HBF5 79 aa15.97■□□□□ 0.15
PTPN13-205ENST00000502971 KIR2DL5BA0A0G2JN68 375 aa15.97■□□□□ 0.15
PTPN13-205ENST00000502971 KIR2DL5BA0A0G2JPC4 375 aa15.97■□□□□ 0.15
PTPN13-205ENST00000502971 KIR2DL5AQ8N109 375 aa15.97■□□□□ 0.15
PTPN13-205ENST00000502971 IGHV3OR16-12A0A075B7B8 117 aa15.96■□□□□ 0.15
PTPN13-205ENST00000502971 TRBV6-5A0A0K0K1A5 114 aa15.96■□□□□ 0.15
PTPN13-205ENST00000502971 TCAPO15273 167 aa15.96■□□□□ 0.15
PTPN13-205ENST00000502971 ORMDL2Q53FV1 153 aa15.96■□□□□ 0.15
PTPN13-205ENST00000502971 WFDC9Q8NEX5 89 aa15.96■□□□□ 0.15
PTPN13-205ENST00000502971 M0QY20 66 aa15.95■□□□□ 0.14
PTPN13-205ENST00000502971 AZU1P20160 251 aa15.95■□□□□ 0.14
PTPN13-205ENST00000502971 IFI27L1Q96BM0 104 aa15.95■□□□□ 0.14
PTPN13-205ENST00000502971 CSTL1Q9H114 145 aa15.95■□□□□ 0.14
PTPN13-205ENST00000502971 COL6A5A8TX70 2615 aa15.95■□□□□ 0.14
PTPN13-205ENST00000502971 LINC01545Q5VT33 79 aa15.94■□□□□ 0.14
PTPN13-205ENST00000502971 IL17DQ8TAD2 202 aa15.94■□□□□ 0.14
PTPN13-205ENST00000502971 RNASE8Q8TDE3 154 aaKnown RBP15.94■□□□□ 0.14
PTPN13-205ENST00000502971 EDA2RQ9HAV5 297 aa15.94■□□□□ 0.14
PTPN13-205ENST00000502971 PAM16Q9Y3D7 125 aa15.94■□□□□ 0.14
PTPN13-205ENST00000502971 POLR2KP53803 58 aaKnown RBP15.94■□□□□ 0.14
PTPN13-205ENST00000502971 TMEM263Q8WUH6 116 aaKnown RBP15.94■□□□□ 0.14
PTPN13-205ENST00000502971 LINC00587B1AMM8 73 aa15.93■□□□□ 0.14
PTPN13-205ENST00000502971 UFSP1Q6NVU6 142 aa15.93■□□□□ 0.14
PTPN13-205ENST00000502971 CSNK1G2-AS1Q8NCQ2 148 aa15.93■□□□□ 0.14
PTPN13-205ENST00000502971 H7C1H1 209 aa15.92■□□□□ 0.14
PTPN13-205ENST00000502971 VCYO14598 125 aa15.92■□□□□ 0.14
PTPN13-205ENST00000502971 NUDT3O95989 172 aa15.92■□□□□ 0.14
PTPN13-205ENST00000502971 DDTP30046 118 aa15.92■□□□□ 0.14
PTPN13-205ENST00000502971 TRAV9-2A0A087WT02 112 aa15.91■□□□□ 0.14
PTPN13-205ENST00000502971 H0Y8G0 127 aa15.91■□□□□ 0.14
PTPN13-205ENST00000502971 ATOH7Q8N100 152 aa15.91■□□□□ 0.14
PTPN13-205ENST00000502971 RHODO00212 210 aa15.91■□□□□ 0.14
PTPN13-205ENST00000502971 CFAP126Q5VTH2 177 aa15.91■□□□□ 0.14
PTPN13-205ENST00000502971 MRPL16Q9NX20 251 aaKnown RBP15.91■□□□□ 0.14
PTPN13-205ENST00000502971 RS1O15537 224 aa15.9■□□□□ 0.14
PTPN13-205ENST00000502971 ATP5LO75964 103 aa15.9■□□□□ 0.14
PTPN13-205ENST00000502971 LGALS9BQ3B8N2 356 aa15.9■□□□□ 0.14
PTPN13-205ENST00000502971 SPATA45Q537H7 98 aa15.9■□□□□ 0.14
PTPN13-205ENST00000502971 LGALS9CQ6DKI2 356 aa15.9■□□□□ 0.14
PTPN13-205ENST00000502971 ZNF705AQ6ZN79 300 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms