RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 MDFICQ9P1T7 246 aa12.44□□□□□ -0.42
ZCCHC3-201ENST00000500893 MXRA5Q9NR99 2828 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 A6NDX4 124 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 PRM2P04554 102 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 DUX3Q96PT4 197 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 MUC4Q99102 2169 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 LOC107984156A0A0G2JMH3 177 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 ARL17AQ8IVW1 177 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
ZCCHC3-201ENST00000500893 DEFB136Q30KP8 78 aa12.42□□□□□ -0.42
ZCCHC3-201ENST00000500893 KIR2DL4Q99706 377 aa12.42□□□□□ -0.42
ZCCHC3-201ENST00000500893 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
ZCCHC3-201ENST00000500893 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
ZCCHC3-201ENST00000500893 SOCS3O14543 225 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 UFSP1Q6NVU6 142 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 USP24Q9UPU5 2620 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 BEX4Q9NWD9 120 aaPredicted RBP12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 B4DSR2 109 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 C12orf74Q32Q52 190 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 SUMO4Q6EEV6 95 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 LENEPQ9Y5L5 61 aa12.41□□□□□ -0.42
ZCCHC3-201ENST00000500893 NF1P21359 2839 aa12.4□□□□□ -0.42
ZCCHC3-201ENST00000500893 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
ZCCHC3-201ENST00000500893 FBN2P35556 2912 aa12.4□□□□□ -0.42
ZCCHC3-201ENST00000500893 TEX48A0A1B0GUV7 120 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 KNCNA6PVL3 124 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 TOMM6Q96B49 74 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 PRORYQ9H606 182 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 H7C2G1 150 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 SNRPD3P62318 126 aaKnown RBP12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 WFDC2Q14508 124 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 SH2D6Q7Z4S9 175 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 C19orf54Q5BKX5 351 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 PLEKHB2Q96CS7 222 aa12.39□□□□□ -0.43
ZCCHC3-201ENST00000500893 IGHV4-4A0A075B6R2 117 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 C11orf44Q8N8P7 122 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 OR5A1Q8NGJ0 315 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 IGLL5B9A064 214 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 C20orf78Q9BR46 151 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 Q8N1Y9 231 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 NEXN-AS1Q8NBZ9 246 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 HIGD1BQ9P298 99 aa12.38□□□□□ -0.43
ZCCHC3-201ENST00000500893 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
ZCCHC3-201ENST00000500893 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
ZCCHC3-201ENST00000500893 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
ZCCHC3-201ENST00000500893 CHD6Q8TD26 2715 aa12.37□□□□□ -0.43
ZCCHC3-201ENST00000500893 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
ZCCHC3-201ENST00000500893 HIVEP2P31629 2446 aa12.36□□□□□ -0.43
ZCCHC3-201ENST00000500893 RNASE13Q5GAN3 156 aaKnown RBP12.36□□□□□ -0.43
ZCCHC3-201ENST00000500893 ZFP2Q6ZN57 461 aa12.36□□□□□ -0.43
ZCCHC3-201ENST00000500893 LINC01546A6NGU7 62 aa12.36□□□□□ -0.43
ZCCHC3-201ENST00000500893 LGALS1P09382 135 aaKnown RBP12.36□□□□□ -0.43
ZCCHC3-201ENST00000500893 ZNF418Q8TF45 676 aaPredicted RBP12.35□□□□□ -0.43
ZCCHC3-201ENST00000500893 DCANP1Q8TF63 244 aa12.35□□□□□ -0.43
ZCCHC3-201ENST00000500893 LINC01549A6NIU2 74 aa12.35□□□□□ -0.43
ZCCHC3-201ENST00000500893 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
ZCCHC3-201ENST00000500893 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
ZCCHC3-201ENST00000500893 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
ZCCHC3-201ENST00000500893 A0A087WW49 117 aa12.34□□□□□ -0.43
ZCCHC3-201ENST00000500893 VCYO14598 125 aa12.34□□□□□ -0.43
ZCCHC3-201ENST00000500893 IGLV1-40P01703 118 aa12.34□□□□□ -0.43
ZCCHC3-201ENST00000500893 FN1P02751 2386 aaKnown RBP12.34□□□□□ -0.43
ZCCHC3-201ENST00000500893 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.43
ZCCHC3-201ENST00000500893 NDUFS8O00217 210 aa12.33□□□□□ -0.43
ZCCHC3-201ENST00000500893 P0DMU3 169 aa12.33□□□□□ -0.43
ZCCHC3-201ENST00000500893 FAM231AP0DMU4 169 aa12.33□□□□□ -0.43
ZCCHC3-201ENST00000500893 FAM231CP0DMU5 169 aa12.33□□□□□ -0.43
ZCCHC3-201ENST00000500893 HERVK_113P61574 105 aa12.33□□□□□ -0.44
ZCCHC3-201ENST00000500893 C18orf65Q6ZTR6 163 aa12.33□□□□□ -0.44
ZCCHC3-201ENST00000500893 GTSF1LQ9H1H1 148 aa12.33□□□□□ -0.44
ZCCHC3-201ENST00000500893 PSMB2P49721 201 aa12.33□□□□□ -0.44
ZCCHC3-201ENST00000500893 A0A1B0GWB2 263 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 ADARB2-AS1A8MUL3 147 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 TRAV12-1A0A0B4J245 112 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 PPP1R17O96001 155 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 SYT8Q8NBV8 401 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 H3BUA1 57 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 SCGB1C2P0DMR2 95 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 SLURP1P55000 103 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 PROK1P58294 105 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 DEFB131AP59861 70 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 KLK9Q2XQG4 91 aa12.32□□□□□ -0.44
ZCCHC3-201ENST00000500893 FLNAP21333 2647 aaKnown RBP12.31□□□□□ -0.44
ZCCHC3-201ENST00000500893 KLLNB2CW77 178 aa12.31□□□□□ -0.44
ZCCHC3-201ENST00000500893 PMVKQ15126 192 aa12.31□□□□□ -0.44
ZCCHC3-201ENST00000500893 TCTEX1D4Q5JR98 221 aa12.31□□□□□ -0.44
ZCCHC3-201ENST00000500893 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
ZCCHC3-201ENST00000500893 G3V4G9 280 aa12.3□□□□□ -0.44
ZCCHC3-201ENST00000500893 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
ZCCHC3-201ENST00000500893 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
ZCCHC3-201ENST00000500893 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
ZCCHC3-201ENST00000500893 TSHBP01222 138 aa12.3□□□□□ -0.44
ZCCHC3-201ENST00000500893 PSMB8P28062 276 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms