RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 VAX2Q9UIW0 290 aa10.58□□□□□ -0.72
MUC1-220ENST00000498431 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
MUC1-220ENST00000498431 PEX7O00628 323 aa10.57□□□□□ -0.72
MUC1-220ENST00000498431 RS1O15537 224 aa10.57□□□□□ -0.72
MUC1-220ENST00000498431 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
MUC1-220ENST00000498431 CYB561D1Q8N8Q1 229 aa10.57□□□□□ -0.72
MUC1-220ENST00000498431 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
MUC1-220ENST00000498431 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
MUC1-220ENST00000498431 RBFOX3A6NFN3 312 aa10.56□□□□□ -0.72
MUC1-220ENST00000498431 DAZ4Q86SG3 579 aaKnown RBP10.56□□□□□ -0.72
MUC1-220ENST00000498431 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
MUC1-220ENST00000498431 BAALCQ8WXS3 180 aa10.56□□□□□ -0.72
MUC1-220ENST00000498431 TREM1Q9NP99 234 aa10.56□□□□□ -0.72
MUC1-220ENST00000498431 DAZ3Q9NR90 486 aaKnown RBP10.56□□□□□ -0.72
MUC1-220ENST00000498431 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
MUC1-220ENST00000498431 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
MUC1-220ENST00000498431 CLLU1Q5K131 121 aa10.55□□□□□ -0.72
MUC1-220ENST00000498431 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
MUC1-220ENST00000498431 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
MUC1-220ENST00000498431 PGPEP1LA6NFU8 196 aa10.54□□□□□ -0.72
MUC1-220ENST00000498431 PDE6DO43924 150 aa10.54□□□□□ -0.72
MUC1-220ENST00000498431 ZNF80P51504 273 aaPredicted RBP10.54□□□□□ -0.72
MUC1-220ENST00000498431 ZNF506Q5JVG8 444 aa10.54□□□□□ -0.72
MUC1-220ENST00000498431 DNAJC30Q96LL9 226 aa10.54□□□□□ -0.72
MUC1-220ENST00000498431 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
MUC1-220ENST00000498431 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 AKR1C3P42330 323 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 FLI1Q01543 452 aaPredicted RBP10.53□□□□□ -0.72
MUC1-220ENST00000498431 TMEM75Q8N9X5 138 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 C11orf52Q96A22 123 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 CHAC1Q9BUX1 264 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 EIF5A2Q9GZV4 153 aaKnown RBP10.53□□□□□ -0.72
MUC1-220ENST00000498431 Q9UF83 564 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 PSG8Q9UQ74 426 aa10.53□□□□□ -0.72
MUC1-220ENST00000498431 TRAV34A0A0B4J273 112 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 OXTP01178 125 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 S100A9P06702 114 aaKnown RBP10.52□□□□□ -0.73
MUC1-220ENST00000498431 LINC00694P0DN24 101 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 TOR2AQ5JU69 321 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 CIRBP-AS1Q8TBR5 109 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 FMC1Q96HJ9 113 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 LINC00479Q96M42 142 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.73
MUC1-220ENST00000498431 GAGE12JA6NER3 117 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 CIDEAO60543 219 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 MGST1P10620 155 aaKnown RBP10.51□□□□□ -0.73
MUC1-220ENST00000498431 UBE2G1P62253 170 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 GAGE1Q13065 139 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 GAGE4Q13068 117 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 GAGE5Q13069 117 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 GAGE13Q4V321 117 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 PRNTQ86SH4 94 aa10.51□□□□□ -0.73
MUC1-220ENST00000498431 TRBV6-1A0A0K0K1D8 114 aa10.5□□□□□ -0.73
MUC1-220ENST00000498431 NDUFS6O75380 124 aaKnown RBP10.5□□□□□ -0.73
MUC1-220ENST00000498431 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
MUC1-220ENST00000498431 PEA15Q15121 130 aa10.5□□□□□ -0.73
MUC1-220ENST00000498431 SAPCD1Q5SSQ6 148 aa10.5□□□□□ -0.73
MUC1-220ENST00000498431 MED9Q9NWA0 146 aa10.5□□□□□ -0.73
MUC1-220ENST00000498431 TMEM250H0YL14 139 aa10.49□□□□□ -0.73
MUC1-220ENST00000498431 Q86TA4 180 aa10.49□□□□□ -0.73
MUC1-220ENST00000498431 ZFP30Q9Y2G7 519 aa10.49□□□□□ -0.73
MUC1-220ENST00000498431 GCGP01275 180 aa10.48□□□□□ -0.73
MUC1-220ENST00000498431 PTH2Q96A98 100 aa10.48□□□□□ -0.73
MUC1-220ENST00000498431 SAMD10Q9BYL1 202 aa10.48□□□□□ -0.73
MUC1-220ENST00000498431 PARLQ9H300 379 aa10.48□□□□□ -0.73
MUC1-220ENST00000498431 SMDT1Q9H4I9 107 aa10.48□□□□□ -0.73
MUC1-220ENST00000498431 LTAP01374 205 aa10.47□□□□□ -0.73
MUC1-220ENST00000498431 SRP19P09132 144 aaKnown RBP10.47□□□□□ -0.73
MUC1-220ENST00000498431 RPL35P42766 123 aaKnown RBP10.47□□□□□ -0.73
MUC1-220ENST00000498431 BAGE2Q86Y30 109 aa10.47□□□□□ -0.73
MUC1-220ENST00000498431 Q8N976 141 aa10.47□□□□□ -0.73
MUC1-220ENST00000498431 JPT2Q9H910 190 aa10.47□□□□□ -0.73
MUC1-220ENST00000498431 IGKV2D-24A0A075B6R9 120 aa10.46□□□□□ -0.73
MUC1-220ENST00000498431 RAB19A4D1S5 217 aa10.46□□□□□ -0.73
MUC1-220ENST00000498431 HNRNPA3P51991 378 aaKnown RBP10.46□□□□□ -0.73
MUC1-220ENST00000498431 SMUG1Q53HV7 270 aa10.46□□□□□ -0.73
MUC1-220ENST00000498431 C14orf178Q8N769 122 aaPredicted RBP10.46□□□□□ -0.73
MUC1-220ENST00000498431 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
MUC1-220ENST00000498431 COX11Q9Y6N1 276 aa10.46□□□□□ -0.73
MUC1-220ENST00000498431 IGLV2-8P01709 118 aa10.45□□□□□ -0.74
MUC1-220ENST00000498431 CEBPGP53567 150 aa10.45□□□□□ -0.74
MUC1-220ENST00000498431 SRSF3P84103 164 aaKnown RBP10.45□□□□□ -0.74
MUC1-220ENST00000498431 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
MUC1-220ENST00000498431 ZFP2Q6ZN57 461 aa10.45□□□□□ -0.74
MUC1-220ENST00000498431 KLK12Q9UKR0 248 aa10.45□□□□□ -0.74
MUC1-220ENST00000498431 GNG4P50150 75 aa10.44□□□□□ -0.74
MUC1-220ENST00000498431 ZNF674Q2M3X9 581 aa10.44□□□□□ -0.74
MUC1-220ENST00000498431 CENPWQ5EE01 88 aa10.44□□□□□ -0.74
MUC1-220ENST00000498431 COX8CQ7Z4L0 72 aa10.44□□□□□ -0.74
MUC1-220ENST00000498431 NIT1Q86X76 327 aa10.44□□□□□ -0.74
MUC1-220ENST00000498431 RMI2Q96E14 147 aa10.44□□□□□ -0.74
MUC1-220ENST00000498431 A0A087WWC5 75 aa10.43□□□□□ -0.74
MUC1-220ENST00000498431 C9JQL5 133 aa10.43□□□□□ -0.74
MUC1-220ENST00000498431 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms