RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 G3V4G9 280 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 CD300EQ496F6 205 aaPredicted RBP12.17□□□□□ -0.46
PCBP4-216ENST00000497390 PSMG4Q5JS54 123 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 TP53TG1Q9Y2A0 90 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 MYMXA0A1B0GTQ4 84 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 TEX48A0A1B0GUV7 120 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 OR11H12B2RN74 326 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 OR11H1Q8NG94 326 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 OR11H2Q8NH07 326 aa12.17□□□□□ -0.46
PCBP4-216ENST00000497390 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 F5H697 171 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 H3BMG7 143 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 FAM159AQ6UWV7 190 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
PCBP4-216ENST00000497390 NIPBLQ6KC79 2804 aaeCLIP12.16□□□□□ -0.46
PCBP4-216ENST00000497390 E9PLD3 99 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 SLC25A16P16260 332 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
PCBP4-216ENST00000497390 WFDC2Q14508 124 aa12.16□□□□□ -0.46
PCBP4-216ENST00000497390 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.46
PCBP4-216ENST00000497390 H3BUA1 57 aa12.15□□□□□ -0.46
PCBP4-216ENST00000497390 PRM2P04554 102 aa12.15□□□□□ -0.46
PCBP4-216ENST00000497390 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
PCBP4-216ENST00000497390 ZNF479Q96JC4 524 aa12.15□□□□□ -0.46
PCBP4-216ENST00000497390 ZNF462Q96JM2 2506 aa12.15□□□□□ -0.46
PCBP4-216ENST00000497390 PSMB8P28062 276 aa12.15□□□□□ -0.47
PCBP4-216ENST00000497390 ZFP2Q6ZN57 461 aa12.15□□□□□ -0.47
PCBP4-216ENST00000497390 NXPH4O95158 308 aa12.14□□□□□ -0.47
PCBP4-216ENST00000497390 SPINK13Q1W4C9 94 aa12.14□□□□□ -0.47
PCBP4-216ENST00000497390 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
PCBP4-216ENST00000497390 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
PCBP4-216ENST00000497390 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
PCBP4-216ENST00000497390 ZNF256Q9Y2P7 627 aaPredicted RBP12.13□□□□□ -0.47
PCBP4-216ENST00000497390 CHD6Q8TD26 2715 aa12.13□□□□□ -0.47
PCBP4-216ENST00000497390 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
PCBP4-216ENST00000497390 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
PCBP4-216ENST00000497390 SDHAF1A6NFY7 115 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 IGIPA6NJ69 53 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 MED14OSP0DP75 135 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 COX6B1P14854 86 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 SYNJ2BPP57105 145 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 Q8N1Y9 231 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
PCBP4-216ENST00000497390 BRI3O95415 125 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 EPG5Q9HCE0 2579 aa12.12□□□□□ -0.47
PCBP4-216ENST00000497390 FOXI2Q6ZQN5 318 aa12.11□□□□□ -0.47
PCBP4-216ENST00000497390 WNK1Q9H4A3 2382 aa12.11□□□□□ -0.47
PCBP4-216ENST00000497390 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
PCBP4-216ENST00000497390 IGHV3-16A0A0C4DH30 117 aa12.1□□□□□ -0.47
PCBP4-216ENST00000497390 C18orf65Q6ZTR6 163 aa12.1□□□□□ -0.47
PCBP4-216ENST00000497390 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
PCBP4-216ENST00000497390 IGHV4OR15-8A0A075B7B6 117 aa12.1□□□□□ -0.47
PCBP4-216ENST00000497390 A0A087WW49 117 aa12.1□□□□□ -0.47
PCBP4-216ENST00000497390 NDUFS8O00217 210 aa12.1□□□□□ -0.47
PCBP4-216ENST00000497390 COTL1Q14019 142 aa12.1□□□□□ -0.47
PCBP4-216ENST00000497390 NACAE9PAV3 2078 aa12.1□□□□□ -0.47
PCBP4-216ENST00000497390 B4DSR2 109 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 HTN1P15515 57 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 NOTCH3Q9UM47 2321 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 A0A0J9YX75 114 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
PCBP4-216ENST00000497390 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 ID1P41134 155 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 INSL3P51460 131 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 SCGB2A2Q13296 93 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
PCBP4-216ENST00000497390 ZNF56Q15929 161 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 TAL2Q16559 108 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 RRN3P1Q2M238 152 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
PCBP4-216ENST00000497390 ETDBQ3ZM63 59 aa12.08□□□□□ -0.48
PCBP4-216ENST00000497390 Q9UF83 564 aa12.08□□□□□ -0.48
PCBP4-216ENST00000497390 IGHV3-73A0A0B4J1V6 119 aa12.08□□□□□ -0.48
PCBP4-216ENST00000497390 K7EMT4 169 aa12.08□□□□□ -0.48
PCBP4-216ENST00000497390 C9orf85Q96MD7 179 aa12.08□□□□□ -0.48
PCBP4-216ENST00000497390 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.48
PCBP4-216ENST00000497390 NAV2Q8IVL1 2488 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 TRBV7-9A0A0J9YWB2 115 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 P0DMU3 169 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 FAM231AP0DMU4 169 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 FAM231CP0DMU5 169 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 PROK1P58294 105 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 USP24Q9UPU5 2620 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 ZNF580Q9UK33 172 aa12.07□□□□□ -0.48
PCBP4-216ENST00000497390 A0A1B0GWB2 263 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 LINC01549A6NIU2 74 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 K7EQG2 157 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 M0QY20 66 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
PCBP4-216ENST00000497390 PRRC2AP48634 2157 aaKnown RBP12.06□□□□□ -0.48
PCBP4-216ENST00000497390 APOMO95445 188 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 TGFAP01135 160 aa12.06□□□□□ -0.48
PCBP4-216ENST00000497390 SRSF9Q13242 221 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCBP4-216ENST00000497390 PMVKQ15126 192 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms