RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 QRICH2Q9H0J4 1663 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 A0A087WSZ3 146 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 HINT1P49773 126 aaPredicted RBP1.75□□□□□ -2.13
VPS36-206ENST00000497149 GNG11P61952 73 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 RBM3P98179 157 aaKnown RBP1.75□□□□□ -2.13
VPS36-206ENST00000497149 NNATQ16517 81 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 FAM27BQ5VT28 67 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 C2orf82Q6UX34 121 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 CASC2Q6XLA1 102 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 ARPINQ7Z6K5 226 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 LINC00269Q8N2A0 174 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 SERP2Q8N6R1 65 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 CYP4F30PQ9H0H9 118 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 NDUFA12Q9UI09 145 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 SPCS1Q9Y6A9 102 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 TRPM1Q7Z4N2 1603 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 TCHHQ07283 1943 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 PLXNA2O75051 1894 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 PARP14Q460N5 1801 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 MAGI2Q86UL8 1455 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 HEATR1Q9H583 2144 aaKnown RBP1.75□□□□□ -2.13
VPS36-206ENST00000497149 MYOFQ9NZM1 2061 aa1.75□□□□□ -2.13
VPS36-206ENST00000497149 ANK1P16157 1881 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 IGKV2D-26A0A0A0MRZ7 120 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 TRAV3A0A0B4J244 114 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 TRAV1-1A0A0B4J248 108 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 TCRBV4S1A1TA0A5B7 111 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 hADV29S1A0JD25 119 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 IBA57-AS1B1ANH7 110 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 H3BRN7 92 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 CFDP00746 253 aaPredicted RBP1.74□□□□□ -2.13
VPS36-206ENST00000497149 IGLV1-51P01701 117 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 IGLC2P0DOY2 106 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 IGLC3P0DOY3 106 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 ADCYAP1P18509 176 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 UBE2G1P62253 170 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 INSL4Q14641 139 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 RHOHQ15669 191 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 PMCHL1Q16048 86 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 KRTAP13-4Q3LI77 160 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 C9orf116Q5BN46 136 aaPredicted RBP1.74□□□□□ -2.13
VPS36-206ENST00000497149 ZNF826PQ6ZT77 177 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 MED12LQ86YW9 2145 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 C20orf78Q9BR46 151 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 NDUFB11Q9NX14 153 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 SBF2Q86WG5 1849 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 MDC1Q14676 2089 aaKnown RBP1.74□□□□□ -2.13
VPS36-206ENST00000497149 SPHKAPQ2M3C7 1700 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 CASP8AP2Q9UKL3 1982 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 ABCC5O15440 1437 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 DAPK1P53355 1430 aa1.74□□□□□ -2.13
VPS36-206ENST00000497149 ZGRF1Q86YA3 2104 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 PPLO60437 1756 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 SORL1Q92673 2214 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 TRAV10A0A0B4J240 114 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 TRAV17A0A0B4J275 112 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 A0A1W2PPM0 123 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 CCL16O15467 120 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 BCE1O60756 84 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 ERC2-IT1O76042 136 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 ACYP1P07311 99 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 MIFP14174 115 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 GNGT1P63211 74 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 NMSQ5H8A3 153 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 S100A7L2Q5SY68 101 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 NXT2Q9NPJ8 142 aaKnown RBP1.73□□□□□ -2.13
VPS36-206ENST00000497149 FANCAO15360 1455 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 MYH4Q9Y623 1939 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 GBF1Q92538 1859 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 PLXNA4Q9HCM2 1894 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 ANKARQ7Z5J8 1434 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 CASKIN1Q8WXD9 1431 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 ARHGAP32A7KAX9 2087 aa1.73□□□□□ -2.13
VPS36-206ENST00000497149 SUPT6HQ7KZ85 1726 aaKnown RBP1.72□□□□□ -2.13
VPS36-206ENST00000497149 PTPRFP10586 1907 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 PTPRDP23468 1912 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 SPTBP11277 2137 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 CLPSP04118 112 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 DEFA4P12838 97 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 SNRPFP62306 86 aaKnown RBP1.72□□□□□ -2.13
VPS36-206ENST00000497149 ERHP84090 104 aaKnown RBP1.72□□□□□ -2.13
VPS36-206ENST00000497149 MIR22HGQ0VDD5 57 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 ETDBQ3ZM63 59 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 BVES-AS1Q5T3Y7 98 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 SLC48A1Q6P1K1 146 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 HEPN1Q6WQI6 88 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 NDUFA11Q86Y39 141 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 FAM19A2Q8N3H0 131 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 C4orf3Q8WVX3 66 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 Q9BRP9 147 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 SPAG17Q6Q759 2223 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 SLX4Q8IY92 1834 aa1.72□□□□□ -2.13
VPS36-206ENST00000497149 MPDZO75970 2070 aa1.71□□□□□ -2.13
VPS36-206ENST00000497149 SCAF11Q99590 1463 aaKnown RBP1.71□□□□□ -2.14
VPS36-206ENST00000497149 EML5Q05BV3 1969 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 EXPH5Q8NEV8 1989 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 SMARCA4P51532 1647 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 IGKV1D-42A0A075B6H8 117 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 TRAV13-2A0A0B4J235 113 aa1.71□□□□□ -2.14
VPS36-206ENST00000497149 TRBV10-3A0A0K0K1G6 114 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms