RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ANK2Q01484 3957 aa0.59□□□□□ -2.32
VPS26A-208ENST00000497022 E9PCH4 1651 aa0.59□□□□□ -2.32
VPS26A-208ENST00000497022 DOCK1Q14185 1865 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 ARAP2Q8WZ64 1704 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 DNMBPQ6XZF7 1577 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 LAMC3Q9Y6N6 1575 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 TRAV30A0A087WSZ9 112 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 LOC107984156A0A0G2JMH3 177 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 C3orf85A0A1B0GTC6 90 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 C20orf202A1L168 122 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 RBAKDNA6NC62 111 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 C10orf142B7Z368 130 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 TPST1O60507 370 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 SNAPC5O75971 98 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 IGKCP01834 107 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 PYYP10082 97 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 GNG4P50150 75 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 NPC2P61916 151 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 PPP3R1P63098 170 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 WHAMMP3Q1A5X7 153 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 CSAG1Q6PB30 78 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 ARL17AQ8IVW1 177 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 C4orf33Q8N1A6 199 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 TCTEX1D1Q8N7M0 179 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 C10orf82Q8WW14 230 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 PPP3R2Q96LZ3 170 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 WFDC10AQ9H1F0 79 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 SERP1Q9Y6X1 66 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 SCN7AQ01118 1682 aa0.58□□□□□ -2.32
VPS26A-208ENST00000497022 LAMA4Q16363 1823 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 PARP14Q460N5 1801 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 ZNF142P52746 1687 aaPredicted RBP0.57□□□□□ -2.32
VPS26A-208ENST00000497022 RREB1Q92766 1687 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 A0A0J9YY99 117 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 CXorf51AA0A1B0GTR3 108 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 IFITM5A6NNB3 132 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 MCRIP1C9JLW8 97 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 JMJD7-PLA2G4BH0Y9G9 81 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 PPYP01298 95 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 IGLV3-1P01715 115 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 S100A8P05109 93 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 ADCYAP1P18509 176 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 GNG2P59768 71 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 S100A10P60903 97 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 PRB3Q04118 309 aaPredicted RBP0.57□□□□□ -2.32
VPS26A-208ENST00000497022 ASB16-AS1Q495Z4 193 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 S100A7L2Q5SY68 101 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 CASC2Q6XLA1 102 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 SBSPONQ8IVN8 264 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 C10orf111Q8N326 155 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 RERGLQ9H628 205 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 RPRMQ9NS64 109 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 NDUFA12Q9UI09 145 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 NOP16Q9Y3C1 178 aaKnown RBP0.57□□□□□ -2.32
VPS26A-208ENST00000497022 C22orf24Q9Y442 160 aa0.57□□□□□ -2.32
VPS26A-208ENST00000497022 CPSF1Q10570 1443 aaKnown RBP0.56□□□□□ -2.32
VPS26A-208ENST00000497022 C10orf71Q711Q0 1435 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 ARHGAP35Q9NRY4 1499 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 TRAV23DV6A0A075B6W5 121 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 TMEM218A2RU14 115 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 BBIP1A8MTZ0 92 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 M0R143 59 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 EDF1O60869 148 aaKnown RBP0.56□□□□□ -2.32
VPS26A-208ENST00000497022 SMIM24O75264 130 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 TNFP01375 233 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 IFNA17P01571 189 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 SPINK8P0C7L1 97 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 PIRTP0C851 137 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 HIST1H1BP16401 226 aaKnown RBP0.56□□□□□ -2.32
VPS26A-208ENST00000497022 CKS2P33552 79 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 TPPP2P59282 170 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 PKIAP61925 76 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 RBM3P98179 157 aaKnown RBP0.56□□□□□ -2.32
VPS26A-208ENST00000497022 SPATA45Q537H7 98 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 PYY3Q5JQD4 70 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 C9orf153Q5TBE3 101 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 ATP11AUNQ6ZP68 121 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 LINC00299Q6ZSB3 139 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 ATP6V0E2Q8NHE4 81 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 VSTM2AQ8TAG5 236 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 FAM213BQ8TBF2 198 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 TSLPQ969D9 159 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 AMELYQ99218 206 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 PRO1933Q9H354 126 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 IER3IP1Q9Y5U9 82 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 AFDNP55196 1824 aaKnown RBP0.56□□□□□ -2.32
VPS26A-208ENST00000497022 PATJQ8NI35 1801 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
VPS26A-208ENST00000497022 ANKRD36BQ8N2N9 1353 aa0.56□□□□□ -2.32
VPS26A-208ENST00000497022 MARF1Q9Y4F3 1742 aaKnown RBP0.55□□□□□ -2.32
VPS26A-208ENST00000497022 CDK12Q9NYV4 1490 aaPredicted RBP0.55□□□□□ -2.32
VPS26A-208ENST00000497022 SBF2Q86WG5 1849 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 A0A087WTM6 91 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 IGHV1-24A0A0C4DH33 117 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 NBDYA0A0U1RRE5 68 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 A0A1W2PRS3 328 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 J3QLW9 94 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 NCR3O14931 201 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 IGHV3-30P01768 117 aa0.55□□□□□ -2.32
VPS26A-208ENST00000497022 RBP4P02753 201 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms