RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 EDA2RQ9HAV5 297 aa12.96□□□□□ -0.33
RGP1-202ENST00000496906 TRBV24-1A0A075B6N3 115 aa12.95□□□□□ -0.34
RGP1-202ENST00000496906 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
RGP1-202ENST00000496906 EVI2AP22794 236 aa12.95□□□□□ -0.34
RGP1-202ENST00000496906 CAMPP49913 170 aa12.95□□□□□ -0.34
RGP1-202ENST00000496906 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
RGP1-202ENST00000496906 SAMD10Q9BYL1 202 aa12.95□□□□□ -0.34
RGP1-202ENST00000496906 CRYGDP07320 174 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 UFSP1Q6NVU6 142 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 C14orf178Q8N769 122 aaPredicted RBP12.94□□□□□ -0.34
RGP1-202ENST00000496906 OR4C5Q8NGB2 326 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 A0A087WWL8 130 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 S100A8P05109 93 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 ZNF479Q96JC4 524 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
RGP1-202ENST00000496906 IGHV3-53P01767 116 aa12.93□□□□□ -0.34
RGP1-202ENST00000496906 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
RGP1-202ENST00000496906 FAM74A4Q5TZK3 123 aa12.93□□□□□ -0.34
RGP1-202ENST00000496906 SMIM15Q7Z3B0 74 aa12.93□□□□□ -0.34
RGP1-202ENST00000496906 TMEM191AQ9H0A3 160 aa12.93□□□□□ -0.34
RGP1-202ENST00000496906 DPH3P1Q9H4G8 78 aa12.93□□□□□ -0.34
RGP1-202ENST00000496906 TGP01266 2768 aa12.92□□□□□ -0.34
RGP1-202ENST00000496906 SMIM17P0DL12 118 aa12.92□□□□□ -0.34
RGP1-202ENST00000496906 LINC00315P59091 139 aa12.92□□□□□ -0.34
RGP1-202ENST00000496906 Q6ZTC4 211 aa12.92□□□□□ -0.34
RGP1-202ENST00000496906 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
RGP1-202ENST00000496906 RHODO00212 210 aa12.91□□□□□ -0.34
RGP1-202ENST00000496906 ZFP2Q6ZN57 461 aa12.91□□□□□ -0.34
RGP1-202ENST00000496906 FAM210BQ96KR6 192 aa12.91□□□□□ -0.34
RGP1-202ENST00000496906 IGHV3-73A0A0B4J1V6 119 aa12.9□□□□□ -0.34
RGP1-202ENST00000496906 CIDEAO60543 219 aa12.9□□□□□ -0.34
RGP1-202ENST00000496906 ATP5G1P05496 136 aa12.9□□□□□ -0.34
RGP1-202ENST00000496906 TMEM136Q6ZRR5 245 aa12.9□□□□□ -0.35
RGP1-202ENST00000496906 MGPP08493 103 aa12.89□□□□□ -0.35
RGP1-202ENST00000496906 HOXA5P20719 270 aa12.89□□□□□ -0.35
RGP1-202ENST00000496906 RAB4BP61018 213 aa12.89□□□□□ -0.35
RGP1-202ENST00000496906 FHL2Q14192 279 aa12.89□□□□□ -0.35
RGP1-202ENST00000496906 COX19Q49B96 90 aa12.89□□□□□ -0.35
RGP1-202ENST00000496906 AMN1Q8IY45 258 aa12.89□□□□□ -0.35
RGP1-202ENST00000496906 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
RGP1-202ENST00000496906 COLCA2A8K830 154 aa12.88□□□□□ -0.35
RGP1-202ENST00000496906 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
RGP1-202ENST00000496906 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
RGP1-202ENST00000496906 ZNF56Q15929 161 aa12.87□□□□□ -0.35
RGP1-202ENST00000496906 TRGV4A0A0C4DH28 118 aa12.86□□□□□ -0.35
RGP1-202ENST00000496906 GATA1P15976 413 aaPredicted RBP12.86□□□□□ -0.35
RGP1-202ENST00000496906 RAB4AP20338 218 aa12.86□□□□□ -0.35
RGP1-202ENST00000496906 Q6ZSN1 163 aa12.86□□□□□ -0.35
RGP1-202ENST00000496906 HLA-DQA1P01909 254 aa12.86□□□□□ -0.35
RGP1-202ENST00000496906 HTN3P15516 51 aa12.86□□□□□ -0.35
RGP1-202ENST00000496906 F5H697 171 aa12.85□□□□□ -0.35
RGP1-202ENST00000496906 F5H768 121 aa12.85□□□□□ -0.35
RGP1-202ENST00000496906 MT-ND6P03923 174 aa12.85□□□□□ -0.35
RGP1-202ENST00000496906 SLAQ13239 276 aa12.85□□□□□ -0.35
RGP1-202ENST00000496906 SUMO4Q6EEV6 95 aa12.85□□□□□ -0.35
RGP1-202ENST00000496906 DNAH7Q8WXX0 4024 aa12.84□□□□□ -0.35
RGP1-202ENST00000496906 MRPL51Q4U2R6 128 aaKnown RBP12.84□□□□□ -0.35
RGP1-202ENST00000496906 HHLA3Q9XRX5 114 aa12.84□□□□□ -0.35
RGP1-202ENST00000496906 DEFB131BA0A096LNP1 70 aa12.83□□□□□ -0.36
RGP1-202ENST00000496906 TRAV10A0A0B4J240 114 aa12.83□□□□□ -0.36
RGP1-202ENST00000496906 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.36
RGP1-202ENST00000496906 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
RGP1-202ENST00000496906 SLC25A29Q8N8R3 303 aa12.83□□□□□ -0.36
RGP1-202ENST00000496906 PRO0255Q9UI72 69 aa12.83□□□□□ -0.36
RGP1-202ENST00000496906 K7EQD1 137 aa12.82□□□□□ -0.36
RGP1-202ENST00000496906 M0QY20 66 aa12.82□□□□□ -0.36
RGP1-202ENST00000496906 RAB5AP20339 215 aa12.82□□□□□ -0.36
RGP1-202ENST00000496906 CRYBA4P53673 196 aa12.82□□□□□ -0.36
RGP1-202ENST00000496906 FRZBQ92765 325 aa12.82□□□□□ -0.36
RGP1-202ENST00000496906 MRAP2Q96G30 205 aa12.82□□□□□ -0.36
RGP1-202ENST00000496906 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
RGP1-202ENST00000496906 APCSP02743 223 aa12.81□□□□□ -0.36
RGP1-202ENST00000496906 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
RGP1-202ENST00000496906 TRAPPC1Q9Y5R8 145 aa12.81□□□□□ -0.36
RGP1-202ENST00000496906 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
RGP1-202ENST00000496906 RPS10P46783 165 aaKnown RBP12.81□□□□□ -0.36
RGP1-202ENST00000496906 RHOHQ15669 191 aa12.81□□□□□ -0.36
RGP1-202ENST00000496906 TRAV26-1A0A087WT03 109 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 D6R8Y8 96 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 SMKR1H3BMG3 65 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 H7C1H1 209 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 NCR2O95944 276 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 P0DMU3 169 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 VSIG2Q96IQ7 327 aa12.8□□□□□ -0.36
RGP1-202ENST00000496906 CKS2P33552 79 aa12.79□□□□□ -0.36
RGP1-202ENST00000496906 FABP9Q0Z7S8 132 aa12.79□□□□□ -0.36
RGP1-202ENST00000496906 PRADC1Q9BSG0 188 aa12.79□□□□□ -0.36
RGP1-202ENST00000496906 Q9UF83 564 aa12.79□□□□□ -0.36
RGP1-202ENST00000496906 A0A0J9YY99 117 aa12.78□□□□□ -0.36
RGP1-202ENST00000496906 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
RGP1-202ENST00000496906 PAX4O43316 350 aa12.78□□□□□ -0.36
RGP1-202ENST00000496906 PPBPP02775 128 aa12.78□□□□□ -0.36
RGP1-202ENST00000496906 KIAA1644Q3SXP7 199 aa12.78□□□□□ -0.36
RGP1-202ENST00000496906 ORMDL3Q8N138 153 aa12.78□□□□□ -0.36
RGP1-202ENST00000496906 LOC100131303A0A0U1RQF7 123 aa12.77□□□□□ -0.36
RGP1-202ENST00000496906 NEXN-AS1Q8NBZ9 246 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms