RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SCGB3A1Q96QR1 104 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 MYO9AB2RTY4 2548 aa9.65□□□□□ -0.86
GARNL3-220ENST00000496711 F5H697 171 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 NPSP0C0P6 89 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 PLNP26678 52 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 Q6ZVH6 145 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 TLN2Q9Y4G6 2542 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 TENM4Q6N022 2769 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 TMEM97Q5BJF2 176 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 ZC2HC1BQ5TFG8 222 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 FAM74A4Q5TZK3 123 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 TMEM160Q9NX00 188 aa9.64□□□□□ -0.87
GARNL3-220ENST00000496711 FLNAP21333 2647 aaKnown RBP9.63□□□□□ -0.87
GARNL3-220ENST00000496711 SORL1Q92673 2214 aa9.63□□□□□ -0.87
GARNL3-220ENST00000496711 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
GARNL3-220ENST00000496711 H3BMM0 161 aa9.63□□□□□ -0.87
GARNL3-220ENST00000496711 J3QKU1 62 aa9.63□□□□□ -0.87
GARNL3-220ENST00000496711 RBMY1A1P0DJD3 496 aaKnown RBP9.63□□□□□ -0.87
GARNL3-220ENST00000496711 RBMY1CP0DJD4 496 aa9.63□□□□□ -0.87
GARNL3-220ENST00000496711 RBMY1FQ15415 496 aaKnown RBP9.63□□□□□ -0.87
GARNL3-220ENST00000496711 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
GARNL3-220ENST00000496711 ESM1Q9NQ30 184 aa9.63□□□□□ -0.87
GARNL3-220ENST00000496711 CBY3A6NI87 242 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 F8VRH5 84 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 H7C1H1 209 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
GARNL3-220ENST00000496711 SEC11AP67812 179 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 KRTAP1-1Q07627 177 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 HSD52Q0P140 79 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 ZNF56Q15929 161 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 GTSCR1Q86UQ5 136 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 MAP6D1Q9H9H5 199 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 TRBV6-5A0A0K0K1A5 114 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
GARNL3-220ENST00000496711 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
GARNL3-220ENST00000496711 TAX1BP3O14907 124 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
GARNL3-220ENST00000496711 NEXN-AS1Q8NBZ9 246 aa9.62□□□□□ -0.87
GARNL3-220ENST00000496711 LINC01549A6NIU2 74 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 VCYO14598 125 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 CRYGDP07320 174 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 DEFB114Q30KQ6 69 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 HIST2H2BDQ6DRA6 164 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 ERASQ7Z444 233 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 BAALCQ8WXS3 180 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 KIR2DL4Q99706 377 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 CYSLTR1Q9Y271 337 aa9.61□□□□□ -0.87
GARNL3-220ENST00000496711 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
GARNL3-220ENST00000496711 SONP18583 2426 aaKnown RBP9.6□□□□□ -0.87
GARNL3-220ENST00000496711 SDHAF1A6NFY7 115 aa9.6□□□□□ -0.87
GARNL3-220ENST00000496711 ZNF124Q15973 351 aa9.6□□□□□ -0.87
GARNL3-220ENST00000496711 ZNF876PQ49A33 203 aa9.6□□□□□ -0.87
GARNL3-220ENST00000496711 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
GARNL3-220ENST00000496711 RAX2Q96IS3 184 aa9.6□□□□□ -0.87
GARNL3-220ENST00000496711 SPAG8Q99932 426 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-220ENST00000496711 YAE1D1Q9NRH1 226 aa9.6□□□□□ -0.87
GARNL3-220ENST00000496711 ZNF256Q9Y2P7 627 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-220ENST00000496711 ZNF469Q96JG9 3925 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-220ENST00000496711 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
GARNL3-220ENST00000496711 M0QY20 66 aa9.59□□□□□ -0.87
GARNL3-220ENST00000496711 FHL3Q13643 280 aa9.59□□□□□ -0.87
GARNL3-220ENST00000496711 CD300EQ496F6 205 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-220ENST00000496711 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.87
GARNL3-220ENST00000496711 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
GARNL3-220ENST00000496711 TP53TG1Q9Y2A0 90 aa9.59□□□□□ -0.87
GARNL3-220ENST00000496711 KMT2BQ9UMN6 2715 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-220ENST00000496711 MORN3Q6PF18 240 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-220ENST00000496711 JMJD8Q96S16 334 aa9.59□□□□□ -0.87
GARNL3-220ENST00000496711 CCDC168Q8NDH2 2452 aa9.59□□□□□ -0.87
GARNL3-220ENST00000496711 CHD6Q8TD26 2715 aa9.58□□□□□ -0.88
GARNL3-220ENST00000496711 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
GARNL3-220ENST00000496711 RIPPLY3P57055 190 aa9.58□□□□□ -0.88
GARNL3-220ENST00000496711 TTTY13Q9BZ97 58 aa9.58□□□□□ -0.88
GARNL3-220ENST00000496711 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 A6NDN8 102 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 CD28P10747 220 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 C11orf44Q8N8P7 122 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 PDZD2O15018 2839 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 NBPF19A0A087WUL8 3843 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 RNASE1P07998 156 aaKnown RBP9.57□□□□□ -0.88
GARNL3-220ENST00000496711 HTN1P15515 57 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 ZNF415Q09FC8 603 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 UBE2V1Q13404 147 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 CHAC1Q9BUX1 264 aa9.57□□□□□ -0.88
GARNL3-220ENST00000496711 NACAE9PAV3 2078 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 CCL24O00175 119 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 SCGB2A2Q13296 93 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 NSUN5P1Q3KNT7 163 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 TMEM141Q96I45 108 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
GARNL3-220ENST00000496711 TRBV25-1A0A075B6N4 114 aa9.55□□□□□ -0.88
GARNL3-220ENST00000496711 IGIPA6NJ69 53 aa9.55□□□□□ -0.88
GARNL3-220ENST00000496711 INSP01308 110 aa9.55□□□□□ -0.88
GARNL3-220ENST00000496711 RHOHQ15669 191 aa9.55□□□□□ -0.88
GARNL3-220ENST00000496711 VAMP3Q15836 100 aa9.55□□□□□ -0.88
GARNL3-220ENST00000496711 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms