RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 JPT2Q9H910 190 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 F5H768 121 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 TRGC1P0CF51 173 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 MSRB1Q9NZV6 116 aa15.36■□□□□ 0.05
C9orf3-222ENST00000496567 RHODO00212 210 aa15.35■□□□□ 0.05
C9orf3-222ENST00000496567 RIGQ13278 110 aa15.35■□□□□ 0.05
C9orf3-222ENST00000496567 ZFP2Q6ZN57 461 aa15.35■□□□□ 0.05
C9orf3-222ENST00000496567 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-222ENST00000496567 YPEL4Q96NS1 127 aa15.35■□□□□ 0.05
C9orf3-222ENST00000496567 TRGV4A0A0C4DH28 118 aa15.34■□□□□ 0.05
C9orf3-222ENST00000496567 SMIM17P0DL12 118 aa15.34■□□□□ 0.05
C9orf3-222ENST00000496567 FAM3BP58499 235 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-222ENST00000496567 SLAQ13239 276 aa15.34■□□□□ 0.05
C9orf3-222ENST00000496567 ELOBQ15370 118 aa15.34■□□□□ 0.05
C9orf3-222ENST00000496567 FAM74A4Q5TZK3 123 aa15.33■□□□□ 0.05
C9orf3-222ENST00000496567 KCNIP4Q6PIL6 250 aa15.33■□□□□ 0.05
C9orf3-222ENST00000496567 SMIM15Q7Z3B0 74 aa15.33■□□□□ 0.05
C9orf3-222ENST00000496567 DNAH7Q8WXX0 4024 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 A0A087WWL8 130 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 NUPR2A6NF83 97 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 CRYGDP07320 174 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 HOXA5P20719 270 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 S100PP25815 95 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 FHL2Q14192 279 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 C14orf178Q8N769 122 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-222ENST00000496567 SAMD10Q9BYL1 202 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 A0A1B0GW15 77 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 UFSP1Q6NVU6 142 aa15.32■□□□□ 0.04
C9orf3-222ENST00000496567 CEMP1Q6PRD7 247 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-222ENST00000496567 TGIF2-C20orf24A0A0A6YYL0 155 aa15.31■□□□□ 0.04
C9orf3-222ENST00000496567 IGHV3-73A0A0B4J1V6 119 aa15.31■□□□□ 0.04
C9orf3-222ENST00000496567 COLCA2A8K830 154 aa15.31■□□□□ 0.04
C9orf3-222ENST00000496567 PRO0255Q9UI72 69 aa15.31■□□□□ 0.04
C9orf3-222ENST00000496567 NACAE9PAV3 2078 aa15.3■□□□□ 0.04
C9orf3-222ENST00000496567 EVI2AP22794 236 aa15.3■□□□□ 0.04
C9orf3-222ENST00000496567 BTF3L4Q96K17 158 aa15.3■□□□□ 0.04
C9orf3-222ENST00000496567 FAM210BQ96KR6 192 aa15.3■□□□□ 0.04
C9orf3-222ENST00000496567 HHLA3Q9XRX5 114 aa15.3■□□□□ 0.04
C9orf3-222ENST00000496567 KLK5Q9Y337 293 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-222ENST00000496567 ATP5L2Q7Z4Y8 100 aa15.29■□□□□ 0.04
C9orf3-222ENST00000496567 DPH3P1Q9H4G8 78 aa15.29■□□□□ 0.04
C9orf3-222ENST00000496567 KIF25-AS1Q9Y6Z4 181 aa15.29■□□□□ 0.04
C9orf3-222ENST00000496567 TRAV9-1A0A075B6T8 112 aa15.28■□□□□ 0.04
C9orf3-222ENST00000496567 S100A8P05109 93 aa15.28■□□□□ 0.04
C9orf3-222ENST00000496567 GATA1P15976 413 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-222ENST00000496567 MRPL54Q6P161 138 aaKnown RBP15.28■□□□□ 0.04
C9orf3-222ENST00000496567 C3orf84H3BNL1 204 aa15.28■□□□□ 0.04
C9orf3-222ENST00000496567 ZFAND6Q6FIF0 208 aa15.28■□□□□ 0.04
C9orf3-222ENST00000496567 TRAV26-1A0A087WT03 109 aa15.27■□□□□ 0.03
C9orf3-222ENST00000496567 CRYBA4P53673 196 aa15.27■□□□□ 0.03
C9orf3-222ENST00000496567 RAB4BP61018 213 aa15.27■□□□□ 0.03
C9orf3-222ENST00000496567 HBBP68871 147 aa15.27■□□□□ 0.03
C9orf3-222ENST00000496567 ZNF56Q15929 161 aa15.27■□□□□ 0.03
C9orf3-222ENST00000496567 TMEM191AQ9H0A3 160 aa15.27■□□□□ 0.03
C9orf3-222ENST00000496567 TRBV24-1A0A075B6N3 115 aa15.26■□□□□ 0.03
C9orf3-222ENST00000496567 TRBV6-4A0A1B0GX49 114 aa15.26■□□□□ 0.03
C9orf3-222ENST00000496567 IGLL5B9A064 214 aa15.26■□□□□ 0.03
C9orf3-222ENST00000496567 PAX4O43316 350 aa15.26■□□□□ 0.03
C9orf3-222ENST00000496567 A0A1B0GXF2 115 aa15.25■□□□□ 0.03
C9orf3-222ENST00000496567 F5H697 171 aa15.25■□□□□ 0.03
C9orf3-222ENST00000496567 H3BNG1 76 aa15.25■□□□□ 0.03
C9orf3-222ENST00000496567 MGPP08493 103 aa15.25■□□□□ 0.03
C9orf3-222ENST00000496567 CAMPP49913 170 aa15.25■□□□□ 0.03
C9orf3-222ENST00000496567 LINC00315P59091 139 aa15.25■□□□□ 0.03
C9orf3-222ENST00000496567 SLC25A29Q8N8R3 303 aa15.25■□□□□ 0.03
C9orf3-222ENST00000496567 A0A0J9YY99 117 aa15.24■□□□□ 0.03
C9orf3-222ENST00000496567 RHOHQ15669 191 aa15.24■□□□□ 0.03
C9orf3-222ENST00000496567 Q6ZSN1 163 aa15.24■□□□□ 0.03
C9orf3-222ENST00000496567 PRADC1Q9BSG0 188 aa15.24■□□□□ 0.03
C9orf3-222ENST00000496567 K7EQD1 137 aa15.23■□□□□ 0.03
C9orf3-222ENST00000496567 C15orf53Q8NAA6 179 aa15.23■□□□□ 0.03
C9orf3-222ENST00000496567 VSIG2Q96IQ7 327 aa15.23■□□□□ 0.03
C9orf3-222ENST00000496567 RAB5AP20339 215 aa15.22■□□□□ 0.03
C9orf3-222ENST00000496567 TCTAP57738 103 aa15.22■□□□□ 0.03
C9orf3-222ENST00000496567 RASL11AQ6T310 242 aa15.22■□□□□ 0.03
C9orf3-222ENST00000496567 CASC10Q5T4H9 136 aa15.21■□□□□ 0.03
C9orf3-222ENST00000496567 CSMD3Q7Z407 3707 aa15.2■□□□□ 0.02
C9orf3-222ENST00000496567 H7C1H1 209 aa15.2■□□□□ 0.02
C9orf3-222ENST00000496567 GATD1Q8NB37 220 aa15.2■□□□□ 0.02
C9orf3-222ENST00000496567 FRZBQ92765 325 aa15.2■□□□□ 0.02
C9orf3-222ENST00000496567 TRBV10-1A0A0K0K1A3 114 aa15.19■□□□□ 0.02
C9orf3-222ENST00000496567 GYPEP15421 78 aa15.19■□□□□ 0.02
C9orf3-222ENST00000496567 NUDT3O95989 172 aa15.19■□□□□ 0.02
C9orf3-222ENST00000496567 FAM104BQ5XKR9 115 aa15.19■□□□□ 0.02
C9orf3-222ENST00000496567 SUMO4Q6EEV6 95 aa15.19■□□□□ 0.02
C9orf3-222ENST00000496567 AMN1Q8IY45 258 aa15.19■□□□□ 0.02
C9orf3-222ENST00000496567 ICOSQ9Y6W8 199 aa15.19■□□□□ 0.02
C9orf3-222ENST00000496567 RAB4AP20338 218 aa15.18■□□□□ 0.02
C9orf3-222ENST00000496567 RPS10P46783 165 aaKnown RBP15.18■□□□□ 0.02
C9orf3-222ENST00000496567 MRPL23Q16540 153 aaKnown RBP15.18■□□□□ 0.02
C9orf3-222ENST00000496567 M0QY20 66 aa15.17■□□□□ 0.02
C9orf3-222ENST00000496567 COX19Q49B96 90 aa15.17■□□□□ 0.02
C9orf3-222ENST00000496567 RNF185Q96GF1 192 aa15.17■□□□□ 0.02
C9orf3-222ENST00000496567 APLNQ9ULZ1 77 aa15.16■□□□□ 0.02
C9orf3-222ENST00000496567 LOC100131303A0A0U1RQF7 123 aa15.15■□□□□ 0.02
C9orf3-222ENST00000496567 MRAP2Q96G30 205 aa15.15■□□□□ 0.02
C9orf3-222ENST00000496567 DYNC2H1Q8NCM8 4307 aaKnown RBP15.15■□□□□ 0.02
C9orf3-222ENST00000496567 A0A096LPF7 62 aa15.15■□□□□ 0.02
C9orf3-222ENST00000496567 P0DMU3 169 aa15.15■□□□□ 0.02
C9orf3-222ENST00000496567 FAM231AP0DMU4 169 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms