RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 MSRB1Q9NZV6 116 aa10.32□□□□□ -0.76
HDAC9-226ENST00000496026 HIGD1CA8MV81 97 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 PPP1R2P9O14990 202 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 MT-ND4LP03901 98 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 CRYGDP07320 174 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 FOXA3P55318 350 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-226ENST00000496026 RNF212Q495C1 297 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 PRADC1Q9BSG0 188 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 MUC4Q99102 2169 aa10.31□□□□□ -0.76
HDAC9-226ENST00000496026 UFSP1Q6NVU6 142 aa10.3□□□□□ -0.76
HDAC9-226ENST00000496026 C14orf178Q8N769 122 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-226ENST00000496026 SLC25A29Q8N8R3 303 aa10.3□□□□□ -0.76
HDAC9-226ENST00000496026 CNFNQ9BYD5 112 aa10.3□□□□□ -0.76
HDAC9-226ENST00000496026 NAT8BQ9UHF3 227 aa10.3□□□□□ -0.76
HDAC9-226ENST00000496026 ICOSQ9Y6W8 199 aa10.3□□□□□ -0.76
HDAC9-226ENST00000496026 TRBV6-4A0A1B0GX49 114 aa10.29□□□□□ -0.76
HDAC9-226ENST00000496026 RHOHQ15669 191 aa10.29□□□□□ -0.76
HDAC9-226ENST00000496026 ZNF56Q15929 161 aa10.29□□□□□ -0.76
HDAC9-226ENST00000496026 ANAPC16Q96DE5 110 aa10.29□□□□□ -0.76
HDAC9-226ENST00000496026 A0A1B0GUT8 65 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 SMIM27A0A1W2PRY6 76 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 F5H697 171 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 MGPP08493 103 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 GYPEP15421 78 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
HDAC9-226ENST00000496026 Q6ZSN1 163 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 SMIM15Q7Z3B0 74 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 NUP35Q8NFH5 326 aa10.28□□□□□ -0.76
HDAC9-226ENST00000496026 CARHSP1Q9Y2V2 147 aaKnown RBP10.28□□□□□ -0.76
HDAC9-226ENST00000496026 A0A096LPF7 62 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 LOC100131303A0A0U1RQF7 123 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 K7EQD1 137 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 LY6G6CO95867 125 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 P0DMU3 169 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 EVI2AP22794 236 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 RAB4BP61018 213 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.77
HDAC9-226ENST00000496026 SRIP30626 198 aa10.26□□□□□ -0.77
HDAC9-226ENST00000496026 RIGQ13278 110 aa10.26□□□□□ -0.77
HDAC9-226ENST00000496026 NDUFA5Q16718 116 aa10.26□□□□□ -0.77
HDAC9-226ENST00000496026 UBE2DNLQ8IWF7 75 aa10.26□□□□□ -0.77
HDAC9-226ENST00000496026 SLC7A5P1Q8MH63 180 aa10.26□□□□□ -0.77
HDAC9-226ENST00000496026 DPH3P1Q9H4G8 78 aa10.26□□□□□ -0.77
HDAC9-226ENST00000496026 KIF25-AS1Q9Y6Z4 181 aa10.26□□□□□ -0.77
HDAC9-226ENST00000496026 DNAH7Q8WXX0 4024 aa10.25□□□□□ -0.77
HDAC9-226ENST00000496026 CCL18P55774 89 aa10.25□□□□□ -0.77
HDAC9-226ENST00000496026 LGALS9CQ6DKI2 356 aa10.25□□□□□ -0.77
HDAC9-226ENST00000496026 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
HDAC9-226ENST00000496026 GAGE12JA6NER3 117 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 APOC3P02656 99 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 GAGE1Q13065 139 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 GAGE4Q13068 117 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 GAGE5Q13069 117 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 GAGE13Q4V321 117 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 NEGR1Q7Z3B1 354 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
HDAC9-226ENST00000496026 LCE6AA0A183 80 aa10.23□□□□□ -0.77
HDAC9-226ENST00000496026 FAM3BP58499 235 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-226ENST00000496026 LINC00315P59091 139 aa10.23□□□□□ -0.77
HDAC9-226ENST00000496026 SH2D6Q7Z4S9 175 aa10.23□□□□□ -0.77
HDAC9-226ENST00000496026 CLRN3Q8NCR9 226 aa10.23□□□□□ -0.77
HDAC9-226ENST00000496026 TRBV10-1A0A0K0K1A3 114 aa10.22□□□□□ -0.77
HDAC9-226ENST00000496026 H7C1H1 209 aa10.22□□□□□ -0.77
HDAC9-226ENST00000496026 RPL36AP83881 106 aaKnown RBP10.22□□□□□ -0.77
HDAC9-226ENST00000496026 RHEBQ15382 184 aa10.22□□□□□ -0.77
HDAC9-226ENST00000496026 SUMO4Q6EEV6 95 aa10.22□□□□□ -0.77
HDAC9-226ENST00000496026 MRPL54Q6P161 138 aaKnown RBP10.22□□□□□ -0.77
HDAC9-226ENST00000496026 RPL36ALQ969Q0 106 aaKnown RBP10.22□□□□□ -0.77
HDAC9-226ENST00000496026 RPS10P5Q9NQ39 176 aa10.22□□□□□ -0.77
HDAC9-226ENST00000496026 A0A1B0GW15 77 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 C7orf77A4D0Y5 90 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 CAMPP49913 170 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 ESRGQ1W209 222 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 KCNIP4Q6PIL6 250 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 SVBPQ8N300 66 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 ATP6V0E2Q8NHE4 81 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 TMEM191AQ9H0A3 160 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 Q9UF83 564 aa10.21□□□□□ -0.77
HDAC9-226ENST00000496026 A0A087WWC5 75 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 NACAE9PAV3 2078 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 SNAPINO95295 136 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 S100A8P05109 93 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 HBBP68871 147 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 LYPD5Q6UWN5 251 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 IMMP2LQ96T52 175 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 LINC00588Q9Y4M8 146 aa10.2□□□□□ -0.78
HDAC9-226ENST00000496026 TRBV7-3A0A075B6L6 115 aa10.19□□□□□ -0.78
HDAC9-226ENST00000496026 TRAV26-2A0A0B4J265 109 aa10.19□□□□□ -0.78
HDAC9-226ENST00000496026 M0QY20 66 aa10.19□□□□□ -0.78
HDAC9-226ENST00000496026 S100PP25815 95 aa10.19□□□□□ -0.78
HDAC9-226ENST00000496026 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
HDAC9-226ENST00000496026 CSMD3Q7Z407 3707 aa10.19□□□□□ -0.78
HDAC9-226ENST00000496026 TENM2Q9NT68 2774 aa10.19□□□□□ -0.78
HDAC9-226ENST00000496026 RASL11AQ6T310 242 aa10.18□□□□□ -0.78
HDAC9-226ENST00000496026 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
HDAC9-226ENST00000496026 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms