RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 TP53TG1Q9Y2A0 90 aa11.13□□□□□ -0.63
UBXN11-215ENST00000494942 LRRK2Q5S007 2527 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 HOXA3O43365 443 aaPredicted RBP11.12□□□□□ -0.63
UBXN11-215ENST00000494942 CRYGDP07320 174 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 PMVKQ15126 192 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 MUC4Q99102 2169 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 AGRNO00468 2067 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 B4DSR2 109 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 COX6B1P14854 86 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 PSMB8P28062 276 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 TIMM17AQ99595 171 aa11.12□□□□□ -0.63
UBXN11-215ENST00000494942 DOPEY1Q5JWR5 2465 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 TRAV12-3A0A0B4J271 114 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 TRBV6-5A0A0K0K1A5 114 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 F5H697 171 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 LGALS9O00182 355 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 GATA3P23771 443 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 SCGB1D4Q6XE38 83 aa11.11□□□□□ -0.63
UBXN11-215ENST00000494942 FASNP49327 2511 aaKnown RBP11.11□□□□□ -0.63
UBXN11-215ENST00000494942 TRBV27A0A0K0K1C4 114 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 TMEM89A2RUT3 159 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 TSHBP01222 138 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 EDN2P20800 178 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
UBXN11-215ENST00000494942 SYT8Q8NBV8 401 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 C9orf85Q96MD7 179 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 JPT2Q9H910 190 aa11.1□□□□□ -0.63
UBXN11-215ENST00000494942 A0A087WWL8 130 aa11.09□□□□□ -0.63
UBXN11-215ENST00000494942 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
UBXN11-215ENST00000494942 H3BMG7 143 aa11.09□□□□□ -0.63
UBXN11-215ENST00000494942 IGHV3-16A0A0C4DH30 117 aa11.09□□□□□ -0.63
UBXN11-215ENST00000494942 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
UBXN11-215ENST00000494942 J3QR89 54 aa11.09□□□□□ -0.63
UBXN11-215ENST00000494942 SRSF9Q13242 221 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBXN11-215ENST00000494942 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
UBXN11-215ENST00000494942 SPTAN1Q13813 2472 aaKnown RBP11.08□□□□□ -0.64
UBXN11-215ENST00000494942 A0A0J9YX75 114 aa11.08□□□□□ -0.64
UBXN11-215ENST00000494942 AVPP01185 164 aa11.08□□□□□ -0.64
UBXN11-215ENST00000494942 WFDC2Q14508 124 aa11.08□□□□□ -0.64
UBXN11-215ENST00000494942 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
UBXN11-215ENST00000494942 WFDC12Q8WWY7 111 aa11.08□□□□□ -0.64
UBXN11-215ENST00000494942 SPANXB1Q9NS25 103 aaPredicted RBP11.08□□□□□ -0.64
UBXN11-215ENST00000494942 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 DSCR9P59020 149 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 MORN3Q6PF18 240 aaPredicted RBP11.07□□□□□ -0.64
UBXN11-215ENST00000494942 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 UBE2D1P51668 147 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 RPL39P62891 51 aaKnown RBP11.07□□□□□ -0.64
UBXN11-215ENST00000494942 TMEM95Q3KNT9 176 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 ZFHX3Q15911 3703 aa11.07□□□□□ -0.64
UBXN11-215ENST00000494942 K7EQG2 157 aa11.06□□□□□ -0.64
UBXN11-215ENST00000494942 ZNF876PQ49A33 203 aa11.06□□□□□ -0.64
UBXN11-215ENST00000494942 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
UBXN11-215ENST00000494942 KLHL30-AS1Q8NEE0 82 aa11.06□□□□□ -0.64
UBXN11-215ENST00000494942 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
UBXN11-215ENST00000494942 RHOHQ15669 191 aa11.06□□□□□ -0.64
UBXN11-215ENST00000494942 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
UBXN11-215ENST00000494942 DOPEY2Q9Y3R5 2298 aa11.05□□□□□ -0.64
UBXN11-215ENST00000494942 IGHV1OR15-1A0A075B7D0 117 aa11.05□□□□□ -0.64
UBXN11-215ENST00000494942 M0QY20 66 aa11.05□□□□□ -0.64
UBXN11-215ENST00000494942 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
UBXN11-215ENST00000494942 TRPT1Q86TN4 253 aaKnown RBP11.05□□□□□ -0.64
UBXN11-215ENST00000494942 Q8N1Y9 231 aa11.05□□□□□ -0.64
UBXN11-215ENST00000494942 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
UBXN11-215ENST00000494942 A0A0J9YY99 117 aa11.04□□□□□ -0.64
UBXN11-215ENST00000494942 IGHV4-59P01825 116 aa11.04□□□□□ -0.64
UBXN11-215ENST00000494942 ZNF56Q15929 161 aa11.04□□□□□ -0.64
UBXN11-215ENST00000494942 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
UBXN11-215ENST00000494942 TRAV12-2A0A075B6T6 113 aa11.04□□□□□ -0.64
UBXN11-215ENST00000494942 DEFB112Q30KQ8 113 aa11.04□□□□□ -0.64
UBXN11-215ENST00000494942 TMEM170BQ5T4T1 132 aa11.04□□□□□ -0.64
UBXN11-215ENST00000494942 USP9YO00507 2555 aaPredicted RBP11.04□□□□□ -0.64
UBXN11-215ENST00000494942 EMP1P54849 157 aa11.03□□□□□ -0.64
UBXN11-215ENST00000494942 ZNF256Q9Y2P7 627 aaPredicted RBP11.03□□□□□ -0.64
UBXN11-215ENST00000494942 CELSR1Q9NYQ6 3014 aa11.03□□□□□ -0.64
UBXN11-215ENST00000494942 IGKV3-20P01619 116 aa11.03□□□□□ -0.64
UBXN11-215ENST00000494942 ETDBQ3ZM63 59 aa11.03□□□□□ -0.64
UBXN11-215ENST00000494942 LYRM7Q5U5X0 104 aa11.03□□□□□ -0.64
UBXN11-215ENST00000494942 NFE4Q86UQ8 179 aa11.03□□□□□ -0.64
UBXN11-215ENST00000494942 RNF152Q8N8N0 203 aa11.03□□□□□ -0.64
UBXN11-215ENST00000494942 DLX4Q92988 240 aaPredicted RBP11.03□□□□□ -0.64
UBXN11-215ENST00000494942 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.64
UBXN11-215ENST00000494942 ZNRF2Q8NHG8 242 aa11.02□□□□□ -0.64
UBXN11-215ENST00000494942 SPINK13Q1W4C9 94 aa11.02□□□□□ -0.65
UBXN11-215ENST00000494942 SLC25A29Q8N8R3 303 aa11.02□□□□□ -0.65
UBXN11-215ENST00000494942 DEFB104AQ8WTQ1 72 aa11.02□□□□□ -0.65
UBXN11-215ENST00000494942 TRGV11A0A075B6L2 103 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 J3QLI3 93 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 C10orf99Q6UWK7 81 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 SH2D6Q7Z4S9 175 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 I3L3M4 83 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 J3QQQ9 107 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 TSPAN13O95857 204 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 SYNJ2BPP57105 145 aa11.01□□□□□ -0.65
UBXN11-215ENST00000494942 TMEM238C9JI98 176 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 ELANEP08246 267 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms