RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RFPL4AA6NLU0 287 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 RFPL4AL1F8VTS6 287 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 H0YJX3 145 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 H3BRN7 92 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 H3BSH0 61 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 M0QZK8 103 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 M0R135 149 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 SLC22A1O15245 554 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 NDUFC2O95298 119 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 IGKV1-5P01602 117 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 IGHV3-7P01780 117 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 PPBPP02775 128 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 SHBGP04278 402 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 LGALS1P09382 135 aaKnown RBP1.72□□□□□ -2.13
SMC4-224ENST00000494612 IDO1P14902 403 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 CCL3L1P16619 93 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 S100A4P26447 101 aaKnown RBP1.72□□□□□ -2.13
SMC4-224ENST00000494612 PSMB8P28062 276 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 POLR2JP52435 117 aaKnown RBP1.72□□□□□ -2.13
SMC4-224ENST00000494612 EDDM3BP56851 147 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 GNG5P63218 68 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 GLYATL3Q5SZD4 288 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 MINOS1Q5TGZ0 78 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 SMIM15Q7Z3B0 74 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 RPP25LQ8N5L8 163 aaKnown RBP1.72□□□□□ -2.13
SMC4-224ENST00000494612 Q96M85 177 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 GINS4Q9BRT9 223 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 RTL8AQ9BWD3 113 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 PRNDQ9UKY0 176 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 HHLA3Q9XRX5 114 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 LHFPL6Q9Y693 200 aa1.72□□□□□ -2.13
SMC4-224ENST00000494612 DNAH10Q8IVF4 4471 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 TRAV41A0A0B4J266 112 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 A0A0G2JQZ4 141 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 C1orf196B1AJZ1 125 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 H7C2G1 150 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 CD14P08571 375 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 TSPAN19P0C672 248 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 DEFA4P12838 97 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 KISS1Q15726 138 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 SMIM21Q3B7S5 101 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 PCOTHQ58A44 107 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 LYRM7Q5U5X0 104 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 LYZL1Q6UWQ5 148 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 TRAPPC6BQ86SZ2 158 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 CLVS1Q8IUQ0 354 aaPredicted RBP1.71□□□□□ -2.14
SMC4-224ENST00000494612 IFT20Q8IY31 132 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 C12orf45Q8N5I9 185 aaPredicted RBP1.71□□□□□ -2.14
SMC4-224ENST00000494612 OR4D11Q8NGI4 311 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 C4orf3Q8WVX3 66 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 GPR146Q96CH1 333 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 C2orf50Q96LR7 162 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 ZNF714Q96N38 554 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 GINS3Q9BRX5 216 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 PBDC1Q9BVG4 233 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 BIN3Q9NQY0 253 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 NDUFB11Q9NX14 153 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 SSR3Q9UNL2 185 aa1.71□□□□□ -2.14
SMC4-224ENST00000494612 KIAA2026Q5HYC2 2103 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 TRAV7A0A075B6U4 112 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 MUC21A0A0G2JKD1 596 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 MUC21A0A140T8X8 626 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 A0A1B0GV72 72 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 ARRDC5A6NEK1 342 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 NUPR2A6NF83 97 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 LY6LH3BQJ8 138 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 CDC42EP2O14613 210 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 IFNA7P01567 189 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 IFNA14P01570 189 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 RBP4P02753 201 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 GPX2P18283 190 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 RPS27P42677 84 aaKnown RBP1.7□□□□□ -2.14
SMC4-224ENST00000494612 ATP5G3P48201 142 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 ZNF80P51504 273 aaPredicted RBP1.7□□□□□ -2.14
SMC4-224ENST00000494612 EMP1P54849 157 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 ERHP84090 104 aaKnown RBP1.7□□□□□ -2.14
SMC4-224ENST00000494612 WHAMMP3Q1A5X7 153 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 HAGHLQ6PII5 290 aaPredicted RBP1.7□□□□□ -2.14
SMC4-224ENST00000494612 LINC00471Q8N535 108 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 C5orf56Q8N8D9 126 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 TMEM106AQ96A25 262 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 SLAMF6Q96DU3 332 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 OR4C12Q96R67 309 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 GPER1Q99527 375 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 ZNF471Q9BX82 626 aaPredicted RBP1.7□□□□□ -2.14
SMC4-224ENST00000494612 TMEM133Q9H2Q1 129 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 RASL12Q9NYN1 266 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 CCDC167Q9P0B6 97 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 PSORS1C2Q9UIG4 136 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 ERGIC3Q9Y282 383 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 MPC1Q9Y5U8 109 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 IER3IP1Q9Y5U9 82 aa1.7□□□□□ -2.14
SMC4-224ENST00000494612 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 STAB2Q8WWQ8 2551 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 UBR4Q5T4S7 5183 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 PPP5D1E7EU14 171 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 BUB1B-PAK6H3BSN5 160 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 J3QRK9 145 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 AIPO00170 330 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 IFNA21P01568 189 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms