RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 RS1O15537 224 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 GAGE7O76087 117 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 GAGE12FP0CL80 117 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 GAGE12GP0CL81 117 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 GAGE12IP0CL82 117 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 SMIM17P0DL12 118 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 FAM222AQ5U5X8 452 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 CFAP126Q5VTH2 177 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 C14orf178Q8N769 122 aaPredicted RBP8.13□□□□□ -1.11
MCF2L-231ENST00000494043 SAMD10Q9BYL1 202 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 DPH3P1Q9H4G8 78 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 KIF25-AS1Q9Y6Z4 181 aa8.13□□□□□ -1.11
MCF2L-231ENST00000494043 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 TRAV4A0A0B4J268 109 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 TEX48A0A1B0GUV7 120 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 CRYGDP07320 174 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 SLAQ13239 276 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 FAM104BQ5XKR9 115 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 UFSP1Q6NVU6 142 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 AMN1Q8IY45 258 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 POM121L12Q8N7R1 296 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 FRZBQ92765 325 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 MRPL18Q9H0U6 180 aaKnown RBP8.12□□□□□ -1.11
MCF2L-231ENST00000494043 CELA1Q9UNI1 258 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 TRAPPC1Q9Y5R8 145 aa8.12□□□□□ -1.11
MCF2L-231ENST00000494043 PRKDCP78527 4128 aaKnown RBP8.12□□□□□ -1.11
MCF2L-231ENST00000494043 COL7A1Q02388 2944 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 A0A0J9YWU9 116 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 RHODO00212 210 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 APCSP02743 223 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 MGPP08493 103 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 SPART-AS1P0CW21 52 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 LINC00315P59091 139 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 FABP9Q0Z7S8 132 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 FAM74A4Q5TZK3 123 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 OR4C5Q8NGB2 326 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 C18orf15Q96N68 181 aa8.11□□□□□ -1.11
MCF2L-231ENST00000494043 TRGC2P03986 189 aa8.1□□□□□ -1.11
MCF2L-231ENST00000494043 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-231ENST00000494043 RAB4AP20338 218 aa8.1□□□□□ -1.11
MCF2L-231ENST00000494043 DAD1P61803 113 aa8.1□□□□□ -1.11
MCF2L-231ENST00000494043 MRPL51Q4U2R6 128 aaKnown RBP8.1□□□□□ -1.11
MCF2L-231ENST00000494043 ZFP2Q6ZN57 461 aa8.1□□□□□ -1.11
MCF2L-231ENST00000494043 ZNF479Q96JC4 524 aa8.1□□□□□ -1.11
MCF2L-231ENST00000494043 IGHV3-73A0A0B4J1V6 119 aa8.09□□□□□ -1.11
MCF2L-231ENST00000494043 PHOX2AO14813 284 aa8.09□□□□□ -1.11
MCF2L-231ENST00000494043 IGHV3-53P01767 116 aa8.09□□□□□ -1.11
MCF2L-231ENST00000494043 ZNF56Q15929 161 aa8.09□□□□□ -1.11
MCF2L-231ENST00000494043 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
MCF2L-231ENST00000494043 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
MCF2L-231ENST00000494043 D6R8Y8 96 aa8.08□□□□□ -1.12
MCF2L-231ENST00000494043 F5H697 171 aa8.08□□□□□ -1.12
MCF2L-231ENST00000494043 CIDEAO60543 219 aa8.08□□□□□ -1.12
MCF2L-231ENST00000494043 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
MCF2L-231ENST00000494043 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
MCF2L-231ENST00000494043 U3KQK5 164 aa8.08□□□□□ -1.12
MCF2L-231ENST00000494043 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
MCF2L-231ENST00000494043 NCR2O95944 276 aa8.07□□□□□ -1.12
MCF2L-231ENST00000494043 PPBPP02775 128 aa8.07□□□□□ -1.12
MCF2L-231ENST00000494043 CKS2P33552 79 aa8.07□□□□□ -1.12
MCF2L-231ENST00000494043 C12orf74Q32Q52 190 aa8.07□□□□□ -1.12
MCF2L-231ENST00000494043 ORMDL3Q8N138 153 aa8.07□□□□□ -1.12
MCF2L-231ENST00000494043 EDA2RQ9HAV5 297 aa8.07□□□□□ -1.12
MCF2L-231ENST00000494043 NACAE9PAV3 2078 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 STAB2Q8WWQ8 2551 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 C1orf196B1AJZ1 125 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 ATP5G1P05496 136 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 GATA1P15976 413 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-231ENST00000494043 FHL2Q14192 279 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 Q6ZSN1 163 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 C11orf45Q8TAV5 145 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 PRELID3AQ96N28 172 aa8.06□□□□□ -1.12
MCF2L-231ENST00000494043 ALKBH7Q9BT30 221 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-231ENST00000494043 TRGV4A0A0C4DH28 118 aa8.05□□□□□ -1.12
MCF2L-231ENST00000494043 H7C1H1 209 aa8.05□□□□□ -1.12
MCF2L-231ENST00000494043 M0QY20 66 aa8.05□□□□□ -1.12
MCF2L-231ENST00000494043 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
MCF2L-231ENST00000494043 SRIP30626 198 aa8.05□□□□□ -1.12
MCF2L-231ENST00000494043 NRACQ8N912 160 aa8.05□□□□□ -1.12
MCF2L-231ENST00000494043 K7EQD1 137 aa8.04□□□□□ -1.12
MCF2L-231ENST00000494043 NPYP01303 97 aa8.04□□□□□ -1.12
MCF2L-231ENST00000494043 HOXA5P20719 270 aa8.04□□□□□ -1.12
MCF2L-231ENST00000494043 NANOS2P60321 138 aaKnown RBP8.04□□□□□ -1.12
MCF2L-231ENST00000494043 Q6ZTC4 211 aa8.04□□□□□ -1.12
MCF2L-231ENST00000494043 LAMTOR2Q9Y2Q5 125 aa8.04□□□□□ -1.12
MCF2L-231ENST00000494043 TRBV6-4A0A1B0GX49 114 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 TNFRSF6BO95407 300 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 PPP1R17O96001 155 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 P0DMU3 169 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 FAM231AP0DMU4 169 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 FAM231CP0DMU5 169 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 RAB5BP61020 215 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms