RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PHLDA1Q8WV24 401 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 AJUBAQ96IF1 538 aa8.03□□□□□ -1.12
PDLIM1-205ENST00000493949 HECTD4Q9Y4D8 3996 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 IGLV2-18A0A075B6J9 118 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 TRBV25-1A0A075B6N4 114 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 A0A087WX48 190 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 A0A1B0GV72 72 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 A0A1W2PRX2 142 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 M0R3E3 92 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 SAP30O75446 220 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 PF4P02776 101 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 LEPP41159 167 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 UBE2E1P51965 193 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 LAGE3Q14657 143 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 ORMDL2Q53FV1 153 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 SAMD13Q5VXD3 122 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 C17orf77Q96MU5 243 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 FANCD2OSQ96PS1 177 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 SPATA25Q9BR10 227 aa8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 TIMM8BQ9Y5J9 83 aaPredicted RBP8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 PLECQ15149 4684 aaKnown RBP8.02□□□□□ -1.13
PDLIM1-205ENST00000493949 M0R381 172 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 SNAI2O43623 268 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 PRSS1P07477 247 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 FAM106CPP0CH98 169 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 GCSHP23434 173 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 CD300EQ496F6 205 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 FAM106AQ4KMX7 169 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 TCTEX1D4Q5JR98 221 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 PAPPA-AS1Q5QFB9 102 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 Q6ZS46 218 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 PCP2Q8IVA1 136 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 Q8N6K4 173 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 LINC00482Q8N8I6 264 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 C20orf78Q9BR46 151 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 MCRIP2Q9BUT9 160 aaKnown RBP8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 HILPDAQ9Y5L2 63 aa8.01□□□□□ -1.13
PDLIM1-205ENST00000493949 IGHV3-21A0A0B4J1V1 117 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 TRBV7-9A0A0J9YWB2 115 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 F8VRH5 84 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 F8W735 103 aaPredicted RBP8□□□□□ -1.13
PDLIM1-205ENST00000493949 H7C1H1 209 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 CLEC3BP05452 202 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 TMEM95Q3KNT9 176 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 ZNF479Q96JC4 524 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 DKK2Q9UBU2 259 aa8□□□□□ -1.13
PDLIM1-205ENST00000493949 ALMS1Q8TCU4 4167 aa7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 IGKV2-40A0A087WW87 121 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 RBMY1BA6NDE4 496 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 RBMY1EA6NEQ0 496 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 IGLL5B9A064 214 aa7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 IGKV2D-40P01614 121 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 ORM1P02763 201 aa7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 RBMY1DP0C7P1 496 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 FXYD2P54710 66 aa7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 ZC2HC1BQ5TFG8 222 aa7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 C9orf47Q6ZRZ4 202 aa7.99□□□□□ -1.13
PDLIM1-205ENST00000493949 SORL1Q92673 2214 aa7.98□□□□□ -1.13
PDLIM1-205ENST00000493949 COX7A1P24310 79 aa7.98□□□□□ -1.13
PDLIM1-205ENST00000493949 RRN3P1Q2M238 152 aa7.98□□□□□ -1.13
PDLIM1-205ENST00000493949 TMEM78Q5T7P6 136 aa7.98□□□□□ -1.13
PDLIM1-205ENST00000493949 RAB37Q96AX2 223 aa7.98□□□□□ -1.13
PDLIM1-205ENST00000493949 SPANXB1Q9NS25 103 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-205ENST00000493949 TSSC4Q9Y5U2 329 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-205ENST00000493949 TMSB15BA0A087X1C1 80 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 TEX48A0A1B0GUV7 120 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 OR11H12B2RN74 326 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 IGHG4P01861 327 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 CTSGP08311 255 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 APELAP0DMC3 54 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 ZNF80P51504 273 aaPredicted RBP7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 RPL24P83731 157 aaKnown RBP7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 C12orf74Q32Q52 190 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 TMEM219Q86XT9 240 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 DYNAPQ8N1N2 210 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 NRACQ8N912 160 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 OR11H1Q8NG94 326 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 OR11H2Q8NH07 326 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 SMIM2Q9BVW6 85 aa7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
PDLIM1-205ENST00000493949 TRBV7-3A0A075B6L6 115 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 IGKV2D-26A0A0A0MRZ7 120 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 TRBV7-1A0A0A6YYK4 115 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 GAGE12HA6NDE8 117 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 M0QXV9 152 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 BUB3O43684 328 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 TCTAP57738 103 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 GAGE13Q4V321 117 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 ZFAND6Q6FIF0 208 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 LHFPL4Q7Z7J7 247 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 TOMM6Q96B49 74 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 SMAD5-AS1Q9Y6J3 95 aa7.96□□□□□ -1.14
PDLIM1-205ENST00000493949 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 SMKR1H3BMG3 65 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 H3BMG7 143 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 FOXE3Q13461 319 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 C10orf99Q6UWK7 81 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms