RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 PKIAP61925 76 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 GAGE1Q13065 139 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 GAGE4Q13068 117 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 GAGE5Q13069 117 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 GAGE13Q4V321 117 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 SFRP2Q96HF1 295 aa9.21□□□□□ -0.94
IRF1-210ENST00000493208 PKD1P98161 4303 aa9.2□□□□□ -0.94
IRF1-210ENST00000493208 TMSB15BA0A087X1C1 80 aa9.2□□□□□ -0.94
IRF1-210ENST00000493208 A0A1B0GV50 99 aa9.2□□□□□ -0.94
IRF1-210ENST00000493208 GRIFINA4D1Z8 144 aa9.2□□□□□ -0.94
IRF1-210ENST00000493208 SPANXN1Q5VSR9 72 aa9.2□□□□□ -0.94
IRF1-210ENST00000493208 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
IRF1-210ENST00000493208 SMIM12Q96EX1 92 aa9.2□□□□□ -0.94
IRF1-210ENST00000493208 KIAA1109Q2LD37 5005 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 A0A087WX48 190 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 PDE6DO43924 150 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 IGHV3-30P01768 117 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 IGHV3-33P01772 117 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 IGHV3-30-3P0DP02 117 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 IGHV3-30-5P0DP03 117 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 CRIP1P50238 77 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 KRTAP10-2P60368 255 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 RPS20P60866 119 aaKnown RBP9.19□□□□□ -0.94
IRF1-210ENST00000493208 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 SCRT2Q9NQ03 307 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 GNG13Q9P2W3 67 aa9.19□□□□□ -0.94
IRF1-210ENST00000493208 TRAV1-1A0A0B4J248 108 aa9.18□□□□□ -0.94
IRF1-210ENST00000493208 SCO2A0A1W2PP80 73 aa9.18□□□□□ -0.94
IRF1-210ENST00000493208 RAB4BP61018 213 aa9.18□□□□□ -0.94
IRF1-210ENST00000493208 PRR27Q6MZM9 219 aa9.18□□□□□ -0.94
IRF1-210ENST00000493208 Q9HAA7 133 aa9.18□□□□□ -0.94
IRF1-210ENST00000493208 TRBV7-3A0A075B6L6 115 aa9.17□□□□□ -0.94
IRF1-210ENST00000493208 A0A087WWL8 130 aa9.17□□□□□ -0.94
IRF1-210ENST00000493208 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
IRF1-210ENST00000493208 ZNF56Q15929 161 aa9.17□□□□□ -0.94
IRF1-210ENST00000493208 SLC51BQ86UW2 128 aa9.17□□□□□ -0.94
IRF1-210ENST00000493208 TCTE3Q8IZS6 198 aa9.17□□□□□ -0.94
IRF1-210ENST00000493208 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
IRF1-210ENST00000493208 F5H697 171 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 H7C1H1 209 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 OR5AL1P0C617 328 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 GCSHP23434 173 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 RPL35P42766 123 aaKnown RBP9.16□□□□□ -0.94
IRF1-210ENST00000493208 GNG4P50150 75 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 UFSP1Q6NVU6 142 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 Q8N1X5 172 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 TNFRSF18Q9Y5U5 241 aa9.16□□□□□ -0.94
IRF1-210ENST00000493208 SULT1A2P50226 295 aa9.15□□□□□ -0.94
IRF1-210ENST00000493208 MEF2BQ02080 365 aaPredicted RBP9.15□□□□□ -0.94
IRF1-210ENST00000493208 Q0VG73 95 aa9.15□□□□□ -0.94
IRF1-210ENST00000493208 C14orf178Q8N769 122 aaPredicted RBP9.15□□□□□ -0.94
IRF1-210ENST00000493208 C11orf52Q96A22 123 aa9.15□□□□□ -0.94
IRF1-210ENST00000493208 MLST8Q9BVC4 326 aa9.15□□□□□ -0.94
IRF1-210ENST00000493208 SAMD10Q9BYL1 202 aa9.15□□□□□ -0.94
IRF1-210ENST00000493208 RBFOX3A6NFN3 312 aa9.14□□□□□ -0.95
IRF1-210ENST00000493208 LINC00694P0DN24 101 aa9.14□□□□□ -0.95
IRF1-210ENST00000493208 CACNG7P62955 275 aa9.14□□□□□ -0.95
IRF1-210ENST00000493208 FRZBQ92765 325 aa9.14□□□□□ -0.95
IRF1-210ENST00000493208 JPT2Q9H910 190 aa9.14□□□□□ -0.95
IRF1-210ENST00000493208 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
IRF1-210ENST00000493208 TMEM262E9PQX1 116 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 F2Z2F3 143 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 SNAI2O43623 268 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 P01737 135 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 CRPP02741 224 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 C1QBP02746 253 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 CCL20P78556 96 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 CENPWQ5EE01 88 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 Q6ZSN1 163 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 Q8N814 137 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 OR10G8Q8NGN5 311 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 MED9Q9NWA0 146 aa9.13□□□□□ -0.95
IRF1-210ENST00000493208 EPM2AB3EWF7 344 aa9.12□□□□□ -0.95
IRF1-210ENST00000493208 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
IRF1-210ENST00000493208 DAZ4Q86SG3 579 aaKnown RBP9.12□□□□□ -0.95
IRF1-210ENST00000493208 AKAP14Q86UN6 197 aa9.12□□□□□ -0.95
IRF1-210ENST00000493208 OR10AG1Q8NH19 301 aa9.12□□□□□ -0.95
IRF1-210ENST00000493208 TPPP3Q9BW30 176 aa9.12□□□□□ -0.95
IRF1-210ENST00000493208 SSBP4Q9BWG4 385 aaPredicted RBP9.12□□□□□ -0.95
IRF1-210ENST00000493208 DAZ3Q9NR90 486 aaKnown RBP9.12□□□□□ -0.95
IRF1-210ENST00000493208 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
IRF1-210ENST00000493208 BCL2P10415 239 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 UBE2D3P61077 147 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 UBE2D2P62837 147 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 C14orf177Q52M58 125 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 NIT1Q86X76 327 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 Q8N976 141 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 FER1L6-AS1Q8NA97 138 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 OR2D3Q8NGH3 330 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 TMEM70Q9BUB7 260 aa9.11□□□□□ -0.95
IRF1-210ENST00000493208 TRBV6-8A0A0A6YYG3 113 aa9.1□□□□□ -0.95
IRF1-210ENST00000493208 BLOC1S1P78537 153 aa9.1□□□□□ -0.95
IRF1-210ENST00000493208 RPL19P84098 196 aaKnown RBP9.1□□□□□ -0.95
IRF1-210ENST00000493208 SMIM15Q7Z3B0 74 aa9.1□□□□□ -0.95
IRF1-210ENST00000493208 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
IRF1-210ENST00000493208 IGKV2D-24A0A075B6R9 120 aa9.09□□□□□ -0.95
IRF1-210ENST00000493208 LRCOL1A6NCL2 159 aa9.09□□□□□ -0.95
IRF1-210ENST00000493208 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
IRF1-210ENST00000493208 CHCHD5Q9BSY4 110 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms