RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ELOBQ15370 118 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 CST9LP1Q5W188 147 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 UFSP1Q6NVU6 142 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 KCNIP4Q6PIL6 250 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 ZFP82Q8N141 532 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 ZC2HC1AQ96GY0 325 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
COL6A1-205ENST00000492851 LTAP01374 205 aa8.3□□□□□ -1.08
COL6A1-205ENST00000492851 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
COL6A1-205ENST00000492851 CHCHD7Q9BUK0 85 aa8.3□□□□□ -1.08
COL6A1-205ENST00000492851 SAMD10Q9BYL1 202 aa8.3□□□□□ -1.08
COL6A1-205ENST00000492851 CYTL1Q9NRR1 136 aa8.3□□□□□ -1.08
COL6A1-205ENST00000492851 GRIFINA4D1Z8 144 aa8.29□□□□□ -1.08
COL6A1-205ENST00000492851 AKR1C3P42330 323 aa8.29□□□□□ -1.08
COL6A1-205ENST00000492851 RPL36AP83881 106 aaKnown RBP8.29□□□□□ -1.08
COL6A1-205ENST00000492851 ZNF345Q14585 488 aa8.29□□□□□ -1.08
COL6A1-205ENST00000492851 FAM74A4Q5TZK3 123 aa8.29□□□□□ -1.08
COL6A1-205ENST00000492851 C14orf178Q8N769 122 aaPredicted RBP8.29□□□□□ -1.08
COL6A1-205ENST00000492851 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
COL6A1-205ENST00000492851 RPL36ALQ969Q0 106 aaKnown RBP8.29□□□□□ -1.08
COL6A1-205ENST00000492851 JPT2Q9H910 190 aa8.29□□□□□ -1.08
COL6A1-205ENST00000492851 TRBV7-3A0A075B6L6 115 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 A0A087WX48 190 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 M0R381 172 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 PFDN1O60925 122 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
COL6A1-205ENST00000492851 EIF5AP63241 154 aaKnown RBP8.28□□□□□ -1.08
COL6A1-205ENST00000492851 DAZ4Q86SG3 579 aaKnown RBP8.28□□□□□ -1.08
COL6A1-205ENST00000492851 KCNRGQ8N5I3 272 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 Q8N976 141 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
COL6A1-205ENST00000492851 DAZ3Q9NR90 486 aaKnown RBP8.28□□□□□ -1.08
COL6A1-205ENST00000492851 A0A0D9SG52 128 aa8.27□□□□□ -1.09
COL6A1-205ENST00000492851 HMSDA8MTL9 139 aa8.27□□□□□ -1.09
COL6A1-205ENST00000492851 G3V3Q6 166 aa8.27□□□□□ -1.09
COL6A1-205ENST00000492851 CXCL1P09341 107 aa8.27□□□□□ -1.09
COL6A1-205ENST00000492851 RAB4BP61018 213 aa8.27□□□□□ -1.09
COL6A1-205ENST00000492851 NIT1Q86X76 327 aa8.27□□□□□ -1.09
COL6A1-205ENST00000492851 A0A087WWL8 130 aa8.26□□□□□ -1.09
COL6A1-205ENST00000492851 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
COL6A1-205ENST00000492851 PAGE4O60829 102 aa8.26□□□□□ -1.09
COL6A1-205ENST00000492851 PKIAP61925 76 aa8.26□□□□□ -1.09
COL6A1-205ENST00000492851 Q0VG73 95 aa8.26□□□□□ -1.09
COL6A1-205ENST00000492851 OR10G8Q8NGN5 311 aa8.26□□□□□ -1.09
COL6A1-205ENST00000492851 KANTRA0A1W2PQU2 76 aa8.25□□□□□ -1.09
COL6A1-205ENST00000492851 UBE2D3P61077 147 aa8.25□□□□□ -1.09
COL6A1-205ENST00000492851 UBE2D2P62837 147 aa8.25□□□□□ -1.09
COL6A1-205ENST00000492851 TMEM97Q5BJF2 176 aa8.25□□□□□ -1.09
COL6A1-205ENST00000492851 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
COL6A1-205ENST00000492851 FAM213BQ8TBF2 198 aa8.25□□□□□ -1.09
COL6A1-205ENST00000492851 ZNF471Q9BX82 626 aaPredicted RBP8.25□□□□□ -1.09
COL6A1-205ENST00000492851 Q9UF83 564 aa8.25□□□□□ -1.09
COL6A1-205ENST00000492851 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
COL6A1-205ENST00000492851 H2AFB1P0C5Y9 115 aa8.24□□□□□ -1.09
COL6A1-205ENST00000492851 TMUB2Q71RG4 321 aa8.24□□□□□ -1.09
COL6A1-205ENST00000492851 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
COL6A1-205ENST00000492851 KLK12Q9UKR0 248 aa8.24□□□□□ -1.09
COL6A1-205ENST00000492851 IGKV2D-24A0A075B6R9 120 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 RBFOX3A6NFN3 312 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 TMEM262E9PQX1 116 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 TEX46H3BTG2 121 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 OR5AL1P0C617 328 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 SMIM17P0DL12 118 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 SPANXN1Q5VSR9 72 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 Q8N3U1 123 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 BAALCQ8WXS3 180 aa8.23□□□□□ -1.09
COL6A1-205ENST00000492851 SSBP4Q9BWG4 385 aaPredicted RBP8.23□□□□□ -1.09
COL6A1-205ENST00000492851 TRBV6-8A0A0A6YYG3 113 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 BCL2L11O43521 198 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 SNAI2O43623 268 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 ZNF56Q15929 161 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 EIF5AL1Q6IS14 154 aaKnown RBP8.22□□□□□ -1.09
COL6A1-205ENST00000492851 ATRAIDQ6UW56 229 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 Q6ZSA8 131 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 UBE2WQ96B02 151 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 FAM30AQ9NZY2 134 aa8.22□□□□□ -1.09
COL6A1-205ENST00000492851 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.21□□□□□ -1.1
COL6A1-205ENST00000492851 SCO2A0A1W2PP80 73 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 F5H697 171 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 SMLR1H3BR10 107 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 LECT2O14960 151 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 CRPP02741 224 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 RAB5CP51148 216 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 PRR27Q6MZM9 219 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 C1orf43Q9BWL3 253 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 MANBALQ9NQG1 85 aa8.21□□□□□ -1.1
COL6A1-205ENST00000492851 SRRM2Q9UQ35 2752 aaKnown RBP8.2□□□□□ -1.1
COL6A1-205ENST00000492851 A0A1B0GV50 99 aa8.2□□□□□ -1.1
COL6A1-205ENST00000492851 WFDC2Q14508 124 aa8.2□□□□□ -1.1
COL6A1-205ENST00000492851 OR10AG1Q8NH19 301 aa8.2□□□□□ -1.1
COL6A1-205ENST00000492851 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
COL6A1-205ENST00000492851 H7C1H1 209 aa8.19□□□□□ -1.1
COL6A1-205ENST00000492851 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
COL6A1-205ENST00000492851 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
COL6A1-205ENST00000492851 HAMPP81172 84 aa8.19□□□□□ -1.1
COL6A1-205ENST00000492851 RPL19P84098 196 aaKnown RBP8.19□□□□□ -1.1
COL6A1-205ENST00000492851 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
COL6A1-205ENST00000492851 SMIM12Q96EX1 92 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 905.6 ms