RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 ZFP30Q9Y2G7 519 aa12.25□□□□□ -0.45
CHD1L-209ENST00000492728 A0A087WWL8 130 aa12.24□□□□□ -0.45
CHD1L-209ENST00000492728 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
CHD1L-209ENST00000492728 LINC01559Q495D7 138 aa12.24□□□□□ -0.45
CHD1L-209ENST00000492728 NTN5Q8WTR8 489 aaPredicted RBP12.24□□□□□ -0.45
CHD1L-209ENST00000492728 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
CHD1L-209ENST00000492728 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
CHD1L-209ENST00000492728 UBE2G1P62253 170 aa12.23□□□□□ -0.45
CHD1L-209ENST00000492728 FAM74A4Q5TZK3 123 aa12.23□□□□□ -0.45
CHD1L-209ENST00000492728 CST9LP1Q5W188 147 aa12.23□□□□□ -0.45
CHD1L-209ENST00000492728 OR11H4Q8NGC9 324 aa12.23□□□□□ -0.45
CHD1L-209ENST00000492728 SRRM2Q9UQ35 2752 aaKnown RBP12.22□□□□□ -0.45
CHD1L-209ENST00000492728 M0R381 172 aa12.22□□□□□ -0.45
CHD1L-209ENST00000492728 LECT2O14960 151 aa12.22□□□□□ -0.45
CHD1L-209ENST00000492728 PAGE4O60829 102 aa12.22□□□□□ -0.45
CHD1L-209ENST00000492728 KCNRGQ8N5I3 272 aa12.22□□□□□ -0.45
CHD1L-209ENST00000492728 SFRP2Q96HF1 295 aa12.22□□□□□ -0.45
CHD1L-209ENST00000492728 A0A1B0GV50 99 aa12.21□□□□□ -0.45
CHD1L-209ENST00000492728 RHODO00212 210 aa12.21□□□□□ -0.45
CHD1L-209ENST00000492728 AKR1C3P42330 323 aa12.21□□□□□ -0.45
CHD1L-209ENST00000492728 SYT8Q8NBV8 401 aa12.21□□□□□ -0.45
CHD1L-209ENST00000492728 FRZBQ92765 325 aa12.21□□□□□ -0.45
CHD1L-209ENST00000492728 TMEM70Q9BUB7 260 aa12.21□□□□□ -0.45
CHD1L-209ENST00000492728 DMBT1Q9UGM3 2413 aaPredicted RBP12.21□□□□□ -0.46
CHD1L-209ENST00000492728 FLG2Q5D862 2391 aaPredicted RBP12.2□□□□□ -0.46
CHD1L-209ENST00000492728 SCO2A0A1W2PP80 73 aa12.2□□□□□ -0.46
CHD1L-209ENST00000492728 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
CHD1L-209ENST00000492728 TCEAL7Q9BRU2 100 aa12.2□□□□□ -0.46
CHD1L-209ENST00000492728 PHLDA3Q9Y5J5 127 aa12.2□□□□□ -0.46
CHD1L-209ENST00000492728 TPT1P13693 172 aaKnown RBP12.19□□□□□ -0.46
CHD1L-209ENST00000492728 ZNF345Q14585 488 aa12.19□□□□□ -0.46
CHD1L-209ENST00000492728 NIT1Q86X76 327 aa12.19□□□□□ -0.46
CHD1L-209ENST00000492728 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
CHD1L-209ENST00000492728 FAM213BQ8TBF2 198 aa12.19□□□□□ -0.46
CHD1L-209ENST00000492728 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
CHD1L-209ENST00000492728 MBD3L1Q8WWY6 194 aa12.18□□□□□ -0.46
CHD1L-209ENST00000492728 TM2D2Q9BX73 214 aa12.18□□□□□ -0.46
CHD1L-209ENST00000492728 A0A087WWC5 75 aa12.17□□□□□ -0.46
CHD1L-209ENST00000492728 SEC11BP0C7V7 166 aa12.17□□□□□ -0.46
CHD1L-209ENST00000492728 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
CHD1L-209ENST00000492728 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
CHD1L-209ENST00000492728 MLST8Q9BVC4 326 aa12.17□□□□□ -0.46
CHD1L-209ENST00000492728 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
CHD1L-209ENST00000492728 UBE2D3P61077 147 aa12.16□□□□□ -0.46
CHD1L-209ENST00000492728 UBE2D2P62837 147 aa12.16□□□□□ -0.46
CHD1L-209ENST00000492728 BAALCQ8WXS3 180 aa12.16□□□□□ -0.46
CHD1L-209ENST00000492728 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
CHD1L-209ENST00000492728 MUC21A0A0G2JKD1 596 aa12.15□□□□□ -0.46
CHD1L-209ENST00000492728 MUC21A0A140T8X8 626 aa12.15□□□□□ -0.46
CHD1L-209ENST00000492728 BCL2L11O43521 198 aa12.15□□□□□ -0.46
CHD1L-209ENST00000492728 LINC01620Q4KN68 170 aa12.15□□□□□ -0.46
CHD1L-209ENST00000492728 Q6ZSA8 131 aa12.15□□□□□ -0.46
CHD1L-209ENST00000492728 ZNF471Q9BX82 626 aaPredicted RBP12.15□□□□□ -0.46
CHD1L-209ENST00000492728 KLK12Q9UKR0 248 aa12.14□□□□□ -0.47
CHD1L-209ENST00000492728 TRBV10-1A0A0K0K1A3 114 aa12.13□□□□□ -0.47
CHD1L-209ENST00000492728 HMSDA8MTL9 139 aa12.13□□□□□ -0.47
CHD1L-209ENST00000492728 UMAD1C9J7I0 102 aa12.13□□□□□ -0.47
CHD1L-209ENST00000492728 TOR2AQ5JU69 321 aa12.13□□□□□ -0.47
CHD1L-209ENST00000492728 SNAI2O43623 268 aa12.12□□□□□ -0.47
CHD1L-209ENST00000492728 C1QBP02746 253 aa12.12□□□□□ -0.47
CHD1L-209ENST00000492728 CXCL1P09341 107 aa12.12□□□□□ -0.47
CHD1L-209ENST00000492728 RPL36AP83881 106 aaKnown RBP12.12□□□□□ -0.47
CHD1L-209ENST00000492728 PRR27Q6MZM9 219 aa12.12□□□□□ -0.47
CHD1L-209ENST00000492728 BAGE2Q86Y30 109 aa12.12□□□□□ -0.47
CHD1L-209ENST00000492728 NEXN-AS1Q8NBZ9 246 aa12.12□□□□□ -0.47
CHD1L-209ENST00000492728 OR10G8Q8NGN5 311 aa12.12□□□□□ -0.47
CHD1L-209ENST00000492728 RPL36ALQ969Q0 106 aaKnown RBP12.12□□□□□ -0.47
CHD1L-209ENST00000492728 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
CHD1L-209ENST00000492728 CCL20P78556 96 aa12.11□□□□□ -0.47
CHD1L-209ENST00000492728 UBE2WQ96B02 151 aa12.11□□□□□ -0.47
CHD1L-209ENST00000492728 DERL1Q9BUN8 251 aa12.11□□□□□ -0.47
CHD1L-209ENST00000492728 SSBP4Q9BWG4 385 aaPredicted RBP12.11□□□□□ -0.47
CHD1L-209ENST00000492728 IGKV2D-24A0A075B6R9 120 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 A0A0D9SG52 128 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 KANTRA0A1W2PQU2 76 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 FAM229AH3BQW9 127 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 PFDN1O60925 122 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 S100A9P06702 114 aaKnown RBP12.1□□□□□ -0.47
CHD1L-209ENST00000492728 H2AFB1P0C5Y9 115 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 ZNF56Q15929 161 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 URGCP-MRPS24S4R325 110 aa12.1□□□□□ -0.47
CHD1L-209ENST00000492728 RAB4BP61018 213 aa12.09□□□□□ -0.47
CHD1L-209ENST00000492728 ATRAIDQ6UW56 229 aa12.09□□□□□ -0.47
CHD1L-209ENST00000492728 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
CHD1L-209ENST00000492728 A0A087WX48 190 aa12.08□□□□□ -0.48
CHD1L-209ENST00000492728 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
CHD1L-209ENST00000492728 OR5AL1P0C617 328 aa12.08□□□□□ -0.48
CHD1L-209ENST00000492728 RPL35P42766 123 aaKnown RBP12.08□□□□□ -0.48
CHD1L-209ENST00000492728 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
CHD1L-209ENST00000492728 TMUB2Q71RG4 321 aa12.08□□□□□ -0.48
CHD1L-209ENST00000492728 C11orf52Q96A22 123 aa12.08□□□□□ -0.48
CHD1L-209ENST00000492728 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.48
CHD1L-209ENST00000492728 SSTP61278 116 aa12.07□□□□□ -0.48
CHD1L-209ENST00000492728 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
CHD1L-209ENST00000492728 RMI2Q96E14 147 aa12.07□□□□□ -0.48
CHD1L-209ENST00000492728 COX11Q9Y6N1 276 aa12.07□□□□□ -0.48
CHD1L-209ENST00000492728 RBFOX3A6NFN3 312 aa12.06□□□□□ -0.48
CHD1L-209ENST00000492728 IGLV2-8P01709 118 aa12.06□□□□□ -0.48
CHD1L-209ENST00000492728 GZMBP10144 247 aa12.06□□□□□ -0.48
CHD1L-209ENST00000492728 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms