RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PMVKQ15126 192 aa3.45□□□□□ -1.86
TRA2B-215ENST00000492417 KRTAP24-1Q3LI83 254 aa3.45□□□□□ -1.86
TRA2B-215ENST00000492417 Q8N6K4 173 aa3.45□□□□□ -1.86
TRA2B-215ENST00000492417 CCDC140Q96MF4 163 aa3.45□□□□□ -1.86
TRA2B-215ENST00000492417 VGLL1Q99990 258 aa3.45□□□□□ -1.86
TRA2B-215ENST00000492417 SLC50A1Q9BRV3 221 aa3.45□□□□□ -1.86
TRA2B-215ENST00000492417 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TEX48A0A1B0GUV7 120 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 C2orf70A6NJV1 201 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 H3BMG7 143 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 M0R2P5 195 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 CRYGCP07315 174 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 COX8AP10176 69 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 IFITM1P13164 125 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 MYCNOSP40205 109 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 HIST1H4AP62805 103 aaKnown RBP3.44□□□□□ -1.86
TRA2B-215ENST00000492417 C9orf66Q5T8R8 295 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 ASPHD1Q5U4P2 390 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TMEM61Q8N0U2 210 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 SHANK2-AS3Q9BTD1 123 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 ZANQ9Y493 2812 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TET2Q6N021 2002 aaPredicted RBP3.44□□□□□ -1.86
TRA2B-215ENST00000492417 IGKV1OR2-108A0A075B7D4 117 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 IGKV3OR2-268A0A0C4DH90 116 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 CD7P09564 240 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 ASIPP42127 132 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 AMTNQ6UX39 209 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 DEFB125Q8N687 156 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 LINC00479Q96M42 142 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TRGV2A0A075B6R0 118 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TRAV26-1A0A087WT03 109 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 A0A096LNT2 108 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TRAV21A0A0B4J279 112 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 GGTLC3B5MD39 225 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 CRYGBP07316 175 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 VPREB1P12018 145 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 EIF4EBP1Q13541 118 aaPredicted RBP3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TDRG1Q3Y452 100 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 C4orf3Q8WVX3 66 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TMEM190Q8WZ59 177 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 NBEAL1Q6ZS30 2694 aa3.44□□□□□ -1.86
TRA2B-215ENST00000492417 TRBV20-1A0A075B6N2 111 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 UBE2L6O14933 153 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 IGHV3-53P01767 116 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 ZNF415Q09FC8 603 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 MORN5Q5VZ52 161 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 GAGE2AQ6NT46 116 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 NDUFA11Q86Y39 141 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 TOMM7Q9P0U1 55 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 LINC01549A6NIU2 74 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 H7C1H1 209 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 J3QL48 77 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 DUSP14O95147 198 aaKnown RBP3.43□□□□□ -1.86
TRA2B-215ENST00000492417 DEFB130BP0DP73 79 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 DEFB130AP0DP74 79 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 EGR2P11161 476 aaPredicted RBP3.43□□□□□ -1.86
TRA2B-215ENST00000492417 IFI27P40305 119 aaPredicted RBP3.43□□□□□ -1.86
TRA2B-215ENST00000492417 CFHR3Q02985 330 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 IL15RAQ13261 267 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 LAGE3Q14657 143 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 VWC2Q2TAL6 325 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 LYZL1Q6UWQ5 148 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 C9orf139Q6ZV77 190 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 LINC00528Q8N1L1 170 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 LINC00482Q8N8I6 264 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 TRAV8-3A0A0A6YYJ7 113 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 F2Z2F3 143 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 PSMB8P28062 276 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 CRYBA4P53673 196 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 TNFRSF18Q9Y5U5 241 aa3.43□□□□□ -1.86
TRA2B-215ENST00000492417 IGHV3-64A0A075B6Q5 118 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 DEFB4AO15263 64 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 TCRAP04437 139 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 EDN2P20800 178 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 SH2D6Q7Z4S9 175 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 AMN1Q8IY45 258 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 DEFB104AQ8WTQ1 72 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 PYGO2Q9BRQ0 406 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 KLK9Q9UKQ9 250 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 V9GYY9 64 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 DCHS2Q6V1P9 2916 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 NOTCH1P46531 2555 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 IGKV3D-20A0A0C4DH25 116 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 RBMY1BA6NDE4 496 aaKnown RBP3.42□□□□□ -1.86
TRA2B-215ENST00000492417 RBMY1EA6NEQ0 496 aaKnown RBP3.42□□□□□ -1.86
TRA2B-215ENST00000492417 RBMY1DP0C7P1 496 aaKnown RBP3.42□□□□□ -1.86
TRA2B-215ENST00000492417 P0C879 139 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 RBMY1A1P0DJD3 496 aaKnown RBP3.42□□□□□ -1.86
TRA2B-215ENST00000492417 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 ZNF114Q8NC26 417 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 LYPD6BQ8NI32 183 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 C1QTNF4Q9BXJ3 329 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 IGHV3-73A0A0B4J1V6 119 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 HERV-K104P63124 156 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 ZNF726P1Q15940 193 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 RCHY1Q96PM5 261 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 WFDC10AQ9H1F0 79 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 SMKR1H3BMG3 65 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 H3BMM0 161 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms