RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 IGHV3-30-3P0DP02 117 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 IGHV3-30-5P0DP03 117 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 S100A4P26447 101 aaKnown RBP5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 UBE2G2P60604 165 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 WFDC2Q14508 124 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 ZNF345Q14585 488 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 LGALSLQ3ZCW2 172 aaPredicted RBP5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 FAM162BQ5T6X4 162 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 MLST8Q9BVC4 326 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 MAP1LC3BQ9GZQ8 125 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 FAM30AQ9NZY2 134 aa5.54□□□□□ -1.52
SMARCB1-207ENST00000491967 TRBV10-1A0A0K0K1A3 114 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 GAGE12JA6NER3 117 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 H3BVH4 76 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 PSCAO43653 123 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 CXCL1P09341 107 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 SEC11BP0C7V7 166 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 GAGE1Q13065 139 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 GAGE4Q13068 117 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 GAGE5Q13069 117 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 GAGE13Q4V321 117 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 ATRAIDQ6UW56 229 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 NIT1Q86X76 327 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 KCNRGQ8N5I3 272 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 SYT8Q8NBV8 401 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 OR10G8Q8NGN5 311 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 FRZBQ92765 325 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 SSBP4Q9BWG4 385 aaPredicted RBP5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 Q9HAA7 133 aa5.53□□□□□ -1.52
SMARCB1-207ENST00000491967 HMSDA8MTL9 139 aa5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 SMR3BP02814 79 aaPredicted RBP5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 S100A9P06702 114 aaKnown RBP5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 TOR2AQ5JU69 321 aa5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 PRR27Q6MZM9 219 aa5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 DAZ4Q86SG3 579 aaKnown RBP5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 DAZ3Q9NR90 486 aaKnown RBP5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 COX11Q9Y6N1 276 aa5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 DNAH8Q96JB1 4490 aa5.52□□□□□ -1.53
SMARCB1-207ENST00000491967 TRBV7-3A0A075B6L6 115 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 A0A087WWL8 130 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 GRIFINA4D1Z8 144 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 M0R036 132 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 SNAI2O43623 268 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 PAGE4O60829 102 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 NKX2-5P52952 324 aaPredicted RBP5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 UBE2D3P61077 147 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 UBE2D2P62837 147 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 TMUB2Q71RG4 321 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 STOML3Q8TAV4 291 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 PHLDA3Q9Y5J5 127 aa5.51□□□□□ -1.53
SMARCB1-207ENST00000491967 MYCBP2O75592 4640 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 A0A0D9SG52 128 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 FAM229AH3BQW9 127 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 OR5AL1P0C617 328 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 TPT1P13693 172 aaKnown RBP5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 RAB4BP61018 213 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 UBE2G1P62253 170 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 CST9LP1Q5W188 147 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 ZFP82Q8N141 532 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 SFT2D1Q8WV19 159 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 DNAJC30Q96LL9 226 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 KIF25-AS1Q9Y6Z4 181 aa5.5□□□□□ -1.53
SMARCB1-207ENST00000491967 TRAV1-1A0A0B4J248 108 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 KANTRA0A1W2PQU2 76 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 M0R381 172 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 AKR1C3P42330 323 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 FAM74A4Q5TZK3 123 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 Q8N976 141 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 BAALCQ8WXS3 180 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 VAX2Q9UIW0 290 aa5.49□□□□□ -1.53
SMARCB1-207ENST00000491967 TRBV6-8A0A0A6YYG3 113 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 SCO2A0A1W2PP80 73 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 BCL2L11O43521 198 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 HAMPP81172 84 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 RPL36AP83881 106 aaKnown RBP5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 ELOBQ15370 118 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 BAGE2Q86Y30 109 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 C9orf62Q8N4C0 152 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 NEXN-AS1Q8NBZ9 246 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 OR10AG1Q8NH19 301 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 RPL36ALQ969Q0 106 aaKnown RBP5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 C11orf52Q96A22 123 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 RMI2Q96E14 147 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 ZNF471Q9BX82 626 aaPredicted RBP5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 KLK12Q9UKR0 248 aa5.48□□□□□ -1.53
SMARCB1-207ENST00000491967 TMSB15BA0A087X1C1 80 aa5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 H2AFB1P0C5Y9 115 aa5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 RPL19P84098 196 aaKnown RBP5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 Q0VG73 95 aa5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 ENHOQ6UWT2 76 aa5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 NTM-AS1Q6ZSK4 140 aa5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 FAM213BQ8TBF2 198 aa5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 URGCP-MRPS24S4R325 110 aa5.47□□□□□ -1.53
SMARCB1-207ENST00000491967 LECT2O14960 151 aa5.46□□□□□ -1.54
SMARCB1-207ENST00000491967 IGLV2-8P01709 118 aa5.46□□□□□ -1.54
SMARCB1-207ENST00000491967 IGLC6P0CF74 106 aa5.46□□□□□ -1.54
SMARCB1-207ENST00000491967 EIF5AP63241 154 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 335.9 ms