RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 HIGD1CA8MV81 97 aa16.24■□□□□ 0.19
SCN5A-213ENST00000491944 NTF3P20783 257 aa16.24■□□□□ 0.19
SCN5A-213ENST00000491944 H3BNG1 76 aa16.23■□□□□ 0.19
SCN5A-213ENST00000491944 CRYGDP07320 174 aa16.23■□□□□ 0.19
SCN5A-213ENST00000491944 UFSP1Q6NVU6 142 aa16.23■□□□□ 0.19
SCN5A-213ENST00000491944 WDR73Q6P4I2 378 aa16.23■□□□□ 0.19
SCN5A-213ENST00000491944 C14orf178Q8N769 122 aaPredicted RBP16.23■□□□□ 0.19
SCN5A-213ENST00000491944 BORCS7Q96B45 105 aa16.23■□□□□ 0.19
SCN5A-213ENST00000491944 FAM231BA6NCW3 169 aa16.22■□□□□ 0.19
SCN5A-213ENST00000491944 SMIM17P0DL12 118 aa16.22■□□□□ 0.19
SCN5A-213ENST00000491944 TWIST1Q15672 202 aa16.22■□□□□ 0.19
SCN5A-213ENST00000491944 RNF212Q495C1 297 aa16.22■□□□□ 0.19
SCN5A-213ENST00000491944 CNFNQ9BYD5 112 aa16.22■□□□□ 0.19
SCN5A-213ENST00000491944 PPP1R2P9O14990 202 aa16.21■□□□□ 0.19
SCN5A-213ENST00000491944 MT-ND4LP03901 98 aa16.21■□□□□ 0.19
SCN5A-213ENST00000491944 TRGC1P0CF51 173 aa16.21■□□□□ 0.19
SCN5A-213ENST00000491944 FOXA3P55318 350 aaPredicted RBP16.21■□□□□ 0.19
SCN5A-213ENST00000491944 SLC25A29Q8N8R3 303 aa16.21■□□□□ 0.19
SCN5A-213ENST00000491944 GYPEP15421 78 aa16.2■□□□□ 0.18
SCN5A-213ENST00000491944 Q6ZSN1 163 aa16.2■□□□□ 0.18
SCN5A-213ENST00000491944 ICOSQ9Y6W8 199 aa16.2■□□□□ 0.18
SCN5A-213ENST00000491944 DYNC2H1Q8NCM8 4307 aaKnown RBP16.19■□□□□ 0.18
SCN5A-213ENST00000491944 TRBV6-4A0A1B0GX49 114 aa16.19■□□□□ 0.18
SCN5A-213ENST00000491944 SMIM27A0A1W2PRY6 76 aa16.19■□□□□ 0.18
SCN5A-213ENST00000491944 ZNF56Q15929 161 aa16.19■□□□□ 0.18
SCN5A-213ENST00000491944 PRADC1Q9BSG0 188 aa16.19■□□□□ 0.18
SCN5A-213ENST00000491944 NAT8BQ9UHF3 227 aa16.19■□□□□ 0.18
SCN5A-213ENST00000491944 LOC100131303A0A0U1RQF7 123 aa16.18■□□□□ 0.18
SCN5A-213ENST00000491944 A0A1B0GUT8 65 aa16.18■□□□□ 0.18
SCN5A-213ENST00000491944 RHOHQ15669 191 aa16.18■□□□□ 0.18
SCN5A-213ENST00000491944 NUP35Q8NFH5 326 aa16.18■□□□□ 0.18
SCN5A-213ENST00000491944 ANAPC16Q96DE5 110 aa16.18■□□□□ 0.18
SCN5A-213ENST00000491944 A0A096LPF7 62 aa16.17■□□□□ 0.18
SCN5A-213ENST00000491944 F5H697 171 aa16.17■□□□□ 0.18
SCN5A-213ENST00000491944 K7EQD1 137 aa16.17■□□□□ 0.18
SCN5A-213ENST00000491944 MGPP08493 103 aa16.17■□□□□ 0.18
SCN5A-213ENST00000491944 EVI2AP22794 236 aa16.17■□□□□ 0.18
SCN5A-213ENST00000491944 C10orf91Q5T1B1 145 aa16.17■□□□□ 0.18
SCN5A-213ENST00000491944 CARHSP1Q9Y2V2 147 aaKnown RBP16.17■□□□□ 0.18
SCN5A-213ENST00000491944 MRPL23Q16540 153 aaKnown RBP16.16■□□□□ 0.18
SCN5A-213ENST00000491944 KIF25-AS1Q9Y6Z4 181 aa16.16■□□□□ 0.18
SCN5A-213ENST00000491944 LY6G6CO95867 125 aa16.15■□□□□ 0.18
SCN5A-213ENST00000491944 RAB4BP61018 213 aa16.15■□□□□ 0.18
SCN5A-213ENST00000491944 SMIM15Q7Z3B0 74 aa16.15■□□□□ 0.18
SCN5A-213ENST00000491944 LINC00476Q8WZB0 136 aa16.15■□□□□ 0.18
SCN5A-213ENST00000491944 P0DMU3 169 aa16.14■□□□□ 0.17
SCN5A-213ENST00000491944 FAM231AP0DMU4 169 aa16.14■□□□□ 0.17
SCN5A-213ENST00000491944 FAM231CP0DMU5 169 aa16.14■□□□□ 0.17
SCN5A-213ENST00000491944 SRIP30626 198 aa16.14■□□□□ 0.17
SCN5A-213ENST00000491944 SLC7A5P1Q8MH63 180 aa16.14■□□□□ 0.17
SCN5A-213ENST00000491944 DPH3P1Q9H4G8 78 aa16.14■□□□□ 0.17
SCN5A-213ENST00000491944 RIGQ13278 110 aa16.13■□□□□ 0.17
SCN5A-213ENST00000491944 LGALS9CQ6DKI2 356 aa16.13■□□□□ 0.17
SCN5A-213ENST00000491944 UBE2DNLQ8IWF7 75 aa16.13■□□□□ 0.17
SCN5A-213ENST00000491944 LCE6AA0A183 80 aa16.13■□□□□ 0.17
SCN5A-213ENST00000491944 LINC00315P59091 139 aa16.12■□□□□ 0.17
SCN5A-213ENST00000491944 NDUFA5Q16718 116 aa16.12■□□□□ 0.17
SCN5A-213ENST00000491944 GAGE12JA6NER3 117 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 APOC3P02656 99 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 CCL18P55774 89 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 GAGE1Q13065 139 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 GAGE4Q13068 117 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 GAGE5Q13069 117 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 GAGE13Q4V321 117 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 NEGR1Q7Z3B1 354 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 Q9UF83 564 aa16.11■□□□□ 0.17
SCN5A-213ENST00000491944 PLECQ15149 4684 aaKnown RBP16.1■□□□□ 0.17
SCN5A-213ENST00000491944 CLRN3Q8NCR9 226 aa16.1■□□□□ 0.17
SCN5A-213ENST00000491944 CTDSP1Q9GZU7 261 aa16.1■□□□□ 0.17
SCN5A-213ENST00000491944 FAM3BP58499 235 aaPredicted RBP16.09■□□□□ 0.17
SCN5A-213ENST00000491944 SUMO4Q6EEV6 95 aa16.09■□□□□ 0.17
SCN5A-213ENST00000491944 MRPL54Q6P161 138 aaKnown RBP16.09■□□□□ 0.17
SCN5A-213ENST00000491944 SH2D6Q7Z4S9 175 aa16.09■□□□□ 0.17
SCN5A-213ENST00000491944 TRBV10-1A0A0K0K1A3 114 aa16.08■□□□□ 0.16
SCN5A-213ENST00000491944 C7orf77A4D0Y5 90 aa16.08■□□□□ 0.16
SCN5A-213ENST00000491944 ESRGQ1W209 222 aa16.08■□□□□ 0.16
SCN5A-213ENST00000491944 CAMPP49913 170 aa16.07■□□□□ 0.16
SCN5A-213ENST00000491944 RHEBQ15382 184 aa16.07■□□□□ 0.16
SCN5A-213ENST00000491944 LINC00588Q9Y4M8 146 aa16.07■□□□□ 0.16
SCN5A-213ENST00000491944 H7C1H1 209 aa16.06■□□□□ 0.16
SCN5A-213ENST00000491944 RPL36AP83881 106 aaKnown RBP16.06■□□□□ 0.16
SCN5A-213ENST00000491944 SVBPQ8N300 66 aa16.06■□□□□ 0.16
SCN5A-213ENST00000491944 ZNRF2Q8NHG8 242 aa16.06■□□□□ 0.16
SCN5A-213ENST00000491944 RPL36ALQ969Q0 106 aaKnown RBP16.06■□□□□ 0.16
SCN5A-213ENST00000491944 TMEM191AQ9H0A3 160 aa16.06■□□□□ 0.16
SCN5A-213ENST00000491944 RPS10P5Q9NQ39 176 aa16.06■□□□□ 0.16
SCN5A-213ENST00000491944 A0A1B0GW15 77 aa16.05■□□□□ 0.16
SCN5A-213ENST00000491944 NEXN-AS1Q8NBZ9 246 aa16.05■□□□□ 0.16
SCN5A-213ENST00000491944 ATP6V0E2Q8NHE4 81 aa16.05■□□□□ 0.16
SCN5A-213ENST00000491944 M0QY20 66 aa16.04■□□□□ 0.16
SCN5A-213ENST00000491944 SNAPINO95295 136 aa16.04■□□□□ 0.16
SCN5A-213ENST00000491944 LINC00694P0DN24 101 aa16.04■□□□□ 0.16
SCN5A-213ENST00000491944 HBBP68871 147 aa16.04■□□□□ 0.16
SCN5A-213ENST00000491944 LYPD5Q6UWN5 251 aa16.04■□□□□ 0.16
SCN5A-213ENST00000491944 TRBV7-3A0A075B6L6 115 aa16.03■□□□□ 0.16
SCN5A-213ENST00000491944 TRAV26-2A0A0B4J265 109 aa16.03■□□□□ 0.16
SCN5A-213ENST00000491944 S100A8P05109 93 aa16.03■□□□□ 0.16
SCN5A-213ENST00000491944 KCNIP4Q6PIL6 250 aa16.03■□□□□ 0.16
SCN5A-213ENST00000491944 IMMP2LQ96T52 175 aa16.03■□□□□ 0.16
SCN5A-213ENST00000491944 LYSTQ99698 3801 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms