RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 H3BMM0 161 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 COX8AP10176 69 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 G0S2P27469 103 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 SUMO2P61956 95 aaKnown RBP7.94□□□□□ -1.14
USP4-214ENST00000491791 DEFB114Q30KQ6 69 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 SLC25A34Q6PIV7 304 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 C18orf65Q6ZTR6 163 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 C3orf56Q8N813 242 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 JMJD8Q96S16 334 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 SPAG8Q99932 426 aaPredicted RBP7.94□□□□□ -1.14
USP4-214ENST00000491791 ESM1Q9NQ30 184 aa7.94□□□□□ -1.14
USP4-214ENST00000491791 TRGV11A0A075B6L2 103 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 TRAV12-1A0A0B4J245 112 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 hDV102S1A0JD36 115 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 J3KRW8 73 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 NDUFA7O95182 113 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 SMIM17P0DL12 118 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 COL5A1-AS1Q5SY13 56 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 C14orf178Q8N769 122 aaPredicted RBP7.93□□□□□ -1.14
USP4-214ENST00000491791 SYT8Q8NBV8 401 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 DLX4Q92988 240 aaPredicted RBP7.93□□□□□ -1.14
USP4-214ENST00000491791 ZMAT5Q9UDW3 170 aaKnown RBP7.93□□□□□ -1.14
USP4-214ENST00000491791 MGAM2Q2M2H8 2515 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 TENM1Q9UKZ4 2725 aa7.93□□□□□ -1.14
USP4-214ENST00000491791 SIVA1O15304 175 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 CD7P09564 240 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 TFPI2P48307 235 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
USP4-214ENST00000491791 ODF1Q14990 250 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 TMEM61Q8N0U2 210 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 TOMM6Q96B49 74 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 DUX5Q96PT3 197 aa7.92□□□□□ -1.14
USP4-214ENST00000491791 TRAV26-2A0A0B4J265 109 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 FGF6P10767 208 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 HILS1P60008 231 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 DEFB136Q30KP8 78 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 BOD1L2Q8IYS8 172 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 Q8N1Y9 231 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 RAX2Q96IS3 184 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
USP4-214ENST00000491791 TSSC4Q9Y5U2 329 aaPredicted RBP7.91□□□□□ -1.14
USP4-214ENST00000491791 MUC4Q99102 2169 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 WIPF1O43516 503 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 CRYGDP07320 174 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 CMC4P56277 68 aaPredicted RBP7.9□□□□□ -1.14
USP4-214ENST00000491791 DEFB131AP59861 70 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 SPINK13Q1W4C9 94 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 LINC01006Q8NI28 216 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 FAM110AQ9BQ89 295 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 MAP6D1Q9H9H5 199 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 MDFICQ9P1T7 246 aa7.9□□□□□ -1.14
USP4-214ENST00000491791 A0A087WX48 190 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 TRBV27A0A0K0K1C4 114 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 CCL24O00175 119 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 VCYO14598 125 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 TCAPO15273 167 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 ANKRD39Q53RE8 183 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 SUMO4Q6EEV6 95 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 LINC00469Q8N7U9 141 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 TIMM8BQ9Y5J9 83 aaPredicted RBP7.89□□□□□ -1.15
USP4-214ENST00000491791 SELENOKQ9Y6D0 94 aa7.89□□□□□ -1.15
USP4-214ENST00000491791 RBMY1BA6NDE4 496 aaKnown RBP7.88□□□□□ -1.15
USP4-214ENST00000491791 RBMY1EA6NEQ0 496 aaKnown RBP7.88□□□□□ -1.15
USP4-214ENST00000491791 M0QY20 66 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 DPM2O94777 84 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 IGKCP01834 107 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 PRSS1P07477 247 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 RBMY1DP0C7P1 496 aaKnown RBP7.88□□□□□ -1.15
USP4-214ENST00000491791 FXYD7P58549 80 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 GAGE1Q13065 139 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 ERASQ7Z444 233 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 STPG4Q8N801 248 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 DYNLRB2Q8TF09 96 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 RPL39LQ96EH5 51 aaKnown RBP7.88□□□□□ -1.15
USP4-214ENST00000491791 MCRIP2Q9BUT9 160 aaKnown RBP7.88□□□□□ -1.15
USP4-214ENST00000491791 DKK2Q9UBU2 259 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
USP4-214ENST00000491791 TRAV12-2A0A075B6T6 113 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 KNCNA6PVL3 124 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.87□□□□□ -1.15
USP4-214ENST00000491791 NUDT3O95989 172 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 MGPP08493 103 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 RBMY1A1P0DJD3 496 aaKnown RBP7.87□□□□□ -1.15
USP4-214ENST00000491791 RBMY1CP0DJD4 496 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 CD28P10747 220 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
USP4-214ENST00000491791 CD300EQ496F6 205 aaPredicted RBP7.87□□□□□ -1.15
USP4-214ENST00000491791 C2orf91Q6ZV80 131 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 NEXN-AS1Q8NBZ9 246 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 SPXQ9BT56 116 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 CSTL1Q9H114 145 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 HIGD1BQ9P298 99 aa7.87□□□□□ -1.15
USP4-214ENST00000491791 H0Y8G0 127 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 H7C1H1 209 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 SPRY2O43597 315 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 PLNP26678 52 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 PROK1P58294 105 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 RHOHQ15669 191 aa7.86□□□□□ -1.15
USP4-214ENST00000491791 BEAN1Q3B7T3 259 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms