RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 PFN1P07737 140 aaKnown RBP5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 SRP19P09132 144 aaKnown RBP5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 ATRAIDQ6UW56 229 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 NKX6-2Q9C056 277 aaPredicted RBP5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 JPT2Q9H910 190 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 MANBALQ9NQG1 85 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 VAX2Q9UIW0 290 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 TRAV8-6A0A0B4J262 113 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 TRAV21A0A0B4J279 112 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 IGKV3D-20A0A0C4DH25 116 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 TRBV6-4A0A1B0GX49 114 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 NDUFS6O75380 124 aaKnown RBP5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 CXorf1O96002 111 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 RNASE3P12724 160 aaKnown RBP5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 HAMPP81172 84 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 FLI1Q01543 452 aaPredicted RBP5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 LELP1Q5T871 98 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 C5orf17Q8NAS9 161 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 PTH2Q96A98 100 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 EPDR1Q9UM22 224 aa5.61□□□□□ -1.51
APOBEC3F-204ENST00000491387 FBLL1A6NHQ2 334 aaKnown RBP5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 CRIP1P50238 77 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 CFAP126Q5VTH2 177 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 Q86TA4 180 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 CYB561D1Q8N8Q1 229 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 SLC25A29Q8N8R3 303 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 CLRN3Q8NCR9 226 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 DEFB104AQ8WTQ1 72 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 KCNS1Q96KK3 526 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 C9orf85Q96MD7 179 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 TM2D2Q9BX73 214 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 SDF2L1Q9HCN8 221 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 ARL2-SNX15V9GYD0 113 aa5.6□□□□□ -1.51
APOBEC3F-204ENST00000491387 HMCN2Q8NDA2 5059 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 FAM74A7A6NL05 159 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 TMEM250H0YL14 139 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 RS1O15537 224 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 PAGE4O60829 102 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 CEBPGP53567 150 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 MEF2BQ02080 365 aaPredicted RBP5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 RHOHQ15669 191 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 ZNF876PQ49A33 203 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 SERTAD4-AS1Q5TG53 156 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 NHLRC2Q8NBF2 726 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 ZC2HC1AQ96GY0 325 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 PRADC1Q9BSG0 188 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 SAMD10Q9BYL1 202 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 GTSF1LQ9H1H1 148 aa5.59□□□□□ -1.51
APOBEC3F-204ENST00000491387 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 TMSB15BA0A087X1C1 80 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 GRIFINA4D1Z8 144 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 H3BVH4 76 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 M0R036 132 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 PEX7O00628 323 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 LINC00694P0DN24 101 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 WFDC2Q14508 124 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 SMUG1Q53HV7 270 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 OR10J3Q5JRS4 329 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 LINC00528Q8N1L1 170 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 C14orf178Q8N769 122 aaPredicted RBP5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 DNAJC30Q96LL9 226 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 Q9HAA7 133 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 TMEM167BQ9NRX6 74 aa5.58□□□□□ -1.52
APOBEC3F-204ENST00000491387 SERTM2A0A1B0GWG4 89 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 A0A1W2PRE2 83 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 PDE6DO43924 150 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 IGHV3-30P01768 117 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 IGHV3-33P01772 117 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 IGHV3-30-3P0DP02 117 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 IGHV3-30-5P0DP03 117 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 MGST1P10620 155 aaKnown RBP5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 RHEBQ15382 184 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 FAM74A3Q4VXF1 159 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 PIK3CD-AS1Q5SR53 167 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 CST9LP1Q5W188 147 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 ATP6V0E2Q8NHE4 81 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 NDFIP1Q9BT67 221 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 PARLQ9H300 379 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 RPS10P5Q9NQ39 176 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 COX11Q9Y6N1 276 aa5.57□□□□□ -1.52
APOBEC3F-204ENST00000491387 C7orf77A4D0Y5 90 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 ZNF727A8MUV8 499 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 SH2D1AO60880 128 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 OXTP01178 125 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 RPL19P84098 196 aaKnown RBP5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 PNRC1Q12796 327 aaPredicted RBP5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 ZFP2Q6ZN57 461 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 CBLN2Q8IUK8 224 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 SMCO4Q9NRQ5 59 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 NAT8Q9UHE5 227 aa5.56□□□□□ -1.52
APOBEC3F-204ENST00000491387 A0A087WWC5 75 aa5.55□□□□□ -1.52
APOBEC3F-204ENST00000491387 SCO2A0A1W2PP80 73 aa5.55□□□□□ -1.52
APOBEC3F-204ENST00000491387 GAGE12JA6NER3 117 aa5.55□□□□□ -1.52
APOBEC3F-204ENST00000491387 B4DEV8 164 aa5.55□□□□□ -1.52
APOBEC3F-204ENST00000491387 GAGE1Q13065 139 aa5.55□□□□□ -1.52
APOBEC3F-204ENST00000491387 GAGE4Q13068 117 aa5.55□□□□□ -1.52
APOBEC3F-204ENST00000491387 GAGE5Q13069 117 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms