RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 M0R143 59 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
SMPD4-219ENST00000491128 OR10J3Q5JRS4 329 aa10.13□□□□□ -0.79
SMPD4-219ENST00000491128 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
SMPD4-219ENST00000491128 OR2K2Q8NGT1 345 aa10.13□□□□□ -0.79
SMPD4-219ENST00000491128 IFI27P40305 119 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-219ENST00000491128 ZNF876PQ49A33 203 aa10.13□□□□□ -0.79
SMPD4-219ENST00000491128 ORMDL3Q8N138 153 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 WFDC9Q8NEX5 89 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 TMEM18Q96B42 140 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 PCP4P48539 62 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 INSL3P51460 131 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 CACNG7P62955 275 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 SMIM15Q7Z3B0 74 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
SMPD4-219ENST00000491128 IGHV4-4A0A075B6R2 117 aa10.11□□□□□ -0.79
SMPD4-219ENST00000491128 AMTP48728 403 aa10.11□□□□□ -0.79
SMPD4-219ENST00000491128 RPL39LQ96EH5 51 aaKnown RBP10.11□□□□□ -0.79
SMPD4-219ENST00000491128 DLEU1O43261 78 aa10.1□□□□□ -0.79
SMPD4-219ENST00000491128 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
SMPD4-219ENST00000491128 F5H697 171 aa10.1□□□□□ -0.79
SMPD4-219ENST00000491128 NPSP0C0P6 89 aa10.1□□□□□ -0.79
SMPD4-219ENST00000491128 NBEAL1Q6ZS30 2694 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 HSBP1O75506 76 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 SCGB1D1O95968 90 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 EMP1P54849 157 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 PRSS3P2Q8NHM4 247 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 TMEM158Q8WZ71 300 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 U3KQK5 164 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 MGAM2Q2M2H8 2515 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 TNFRSF6BO95407 300 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 LINC00614P0C842 121 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 KRTAP10-11P60412 298 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 SHISA2Q6UWI4 295 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 AP1S3Q96PC3 154 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 MDFIQ99750 246 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 GOLT1BQ9Y3E0 138 aa10.09□□□□□ -0.79
SMPD4-219ENST00000491128 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-219ENST00000491128 Q6ZWC4 215 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 LINC00315P59091 139 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 GAGE1Q13065 139 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 LINC00173Q6ZV60 143 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 NEGR1Q7Z3B1 354 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 KIF25-AS1Q9Y6Z4 181 aa10.08□□□□□ -0.8
SMPD4-219ENST00000491128 SMIM17P0DL12 118 aa10.07□□□□□ -0.8
SMPD4-219ENST00000491128 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
SMPD4-219ENST00000491128 FAM110AQ9BQ89 295 aa10.07□□□□□ -0.8
SMPD4-219ENST00000491128 G3V4G9 280 aa10.07□□□□□ -0.8
SMPD4-219ENST00000491128 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
SMPD4-219ENST00000491128 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
SMPD4-219ENST00000491128 Q9UF83 564 aa10.07□□□□□ -0.8
SMPD4-219ENST00000491128 NXPH4O95158 308 aa10.06□□□□□ -0.8
SMPD4-219ENST00000491128 PRB2P02812 416 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-219ENST00000491128 CRYGDP07320 174 aa10.06□□□□□ -0.8
SMPD4-219ENST00000491128 ZNF56Q15929 161 aa10.06□□□□□ -0.8
SMPD4-219ENST00000491128 NRACQ8N912 160 aa10.06□□□□□ -0.8
SMPD4-219ENST00000491128 RASL10AQ92737 203 aa10.06□□□□□ -0.8
SMPD4-219ENST00000491128 MCRIP2Q9BUT9 160 aaKnown RBP10.06□□□□□ -0.8
SMPD4-219ENST00000491128 IGHV1-24A0A0C4DH33 117 aa10.06□□□□□ -0.8
SMPD4-219ENST00000491128 ZNF705AQ6ZN79 300 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-219ENST00000491128 P0DMU3 169 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 ZNF415Q09FC8 603 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 SUMO4Q6EEV6 95 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 FA2HQ7L5A8 372 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 SYT8Q8NBV8 401 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
SMPD4-219ENST00000491128 TRGV1A0A0A0MS02 117 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 DEFB4AO15263 64 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 IGHV3-53P01767 116 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 ESDP10768 282 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 KRTDAPP60985 99 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 DEFB135Q30KP9 77 aa10.05□□□□□ -0.8
SMPD4-219ENST00000491128 RNASE8Q8TDE3 154 aaKnown RBP10.05□□□□□ -0.8
SMPD4-219ENST00000491128 H0Y8G0 127 aa10.04□□□□□ -0.8
SMPD4-219ENST00000491128 Q6ZSN1 163 aa10.04□□□□□ -0.8
SMPD4-219ENST00000491128 Q6ZTI0 123 aa10.04□□□□□ -0.8
SMPD4-219ENST00000491128 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
SMPD4-219ENST00000491128 NACAE9PAV3 2078 aa10.04□□□□□ -0.8
SMPD4-219ENST00000491128 M0R2P5 195 aa10.04□□□□□ -0.8
SMPD4-219ENST00000491128 IGHV4-30-4P0DP06 118 aa10.03□□□□□ -0.8
SMPD4-219ENST00000491128 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
SMPD4-219ENST00000491128 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
SMPD4-219ENST00000491128 RIPPLY3P57055 190 aa10.03□□□□□ -0.8
SMPD4-219ENST00000491128 PPBPP02775 128 aa10.02□□□□□ -0.81
SMPD4-219ENST00000491128 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
SMPD4-219ENST00000491128 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.81
SMPD4-219ENST00000491128 POM121L12Q8N7R1 296 aa10.02□□□□□ -0.81
SMPD4-219ENST00000491128 MIEN1Q9BRT3 115 aa10.02□□□□□ -0.81
SMPD4-219ENST00000491128 A0A096LNJ9 63 aa10.01□□□□□ -0.81
SMPD4-219ENST00000491128 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
SMPD4-219ENST00000491128 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms