RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
SNX12-205ENST00000490561 FRZBQ92765 325 aa9.43□□□□□ -0.9
SNX12-205ENST00000490561 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
SNX12-205ENST00000490561 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
SNX12-205ENST00000490561 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
SNX12-205ENST00000490561 MT-ND6P03923 174 aa9.42□□□□□ -0.9
SNX12-205ENST00000490561 GNB1LQ9BYB4 327 aa9.42□□□□□ -0.9
SNX12-205ENST00000490561 MSRB1Q9NZV6 116 aa9.42□□□□□ -0.9
SNX12-205ENST00000490561 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
SNX12-205ENST00000490561 TGIF2-C20orf24A0A0A6YYL0 155 aa9.41□□□□□ -0.9
SNX12-205ENST00000490561 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
SNX12-205ENST00000490561 ATP5G1P05496 136 aa9.41□□□□□ -0.9
SNX12-205ENST00000490561 RAB4BP61018 213 aa9.41□□□□□ -0.9
SNX12-205ENST00000490561 SLAQ13239 276 aa9.41□□□□□ -0.9
SNX12-205ENST00000490561 C14orf178Q8N769 122 aaPredicted RBP9.41□□□□□ -0.9
SNX12-205ENST00000490561 PRKDCP78527 4128 aaKnown RBP9.41□□□□□ -0.9
SNX12-205ENST00000490561 SCO1O75880 301 aa9.4□□□□□ -0.9
SNX12-205ENST00000490561 CRYGDP07320 174 aa9.4□□□□□ -0.9
SNX12-205ENST00000490561 EVI2AP22794 236 aa9.4□□□□□ -0.9
SNX12-205ENST00000490561 C12orf74Q32Q52 190 aa9.4□□□□□ -0.9
SNX12-205ENST00000490561 FAM74A4Q5TZK3 123 aa9.4□□□□□ -0.9
SNX12-205ENST00000490561 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
SNX12-205ENST00000490561 MUC4Q99102 2169 aa9.4□□□□□ -0.91
SNX12-205ENST00000490561 A0A087WWL8 130 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 H7C1H1 209 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 FAM104BQ5XKR9 115 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 UFSP1Q6NVU6 142 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 POM121L12Q8N7R1 296 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 ZNF479Q96JC4 524 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 JPT2Q9H910 190 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 EDA2RQ9HAV5 297 aa9.39□□□□□ -0.91
SNX12-205ENST00000490561 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
SNX12-205ENST00000490561 F5H697 171 aa9.38□□□□□ -0.91
SNX12-205ENST00000490561 MGPP08493 103 aa9.38□□□□□ -0.91
SNX12-205ENST00000490561 ZNF56Q15929 161 aa9.38□□□□□ -0.91
SNX12-205ENST00000490561 TMEM136Q6ZRR5 245 aa9.38□□□□□ -0.91
SNX12-205ENST00000490561 MRAP2Q96G30 205 aa9.38□□□□□ -0.91
SNX12-205ENST00000490561 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
SNX12-205ENST00000490561 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 COLCA2A8K830 154 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 PPP1R17O96001 155 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 PPBPP02775 128 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 GATA1P15976 413 aaPredicted RBP9.37□□□□□ -0.91
SNX12-205ENST00000490561 RAB4AP20338 218 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 LINC00315P59091 139 aa9.37□□□□□ -0.91
SNX12-205ENST00000490561 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
SNX12-205ENST00000490561 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 APCSP02743 223 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 RAB5AP20339 215 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 FHL2Q14192 279 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 Q6ZTC4 211 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 AMN1Q8IY45 258 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 PRO0255Q9UI72 69 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 TRAPPC1Q9Y5R8 145 aa9.36□□□□□ -0.91
SNX12-205ENST00000490561 IGHV3-73A0A0B4J1V6 119 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 TRBV10-1A0A0K0K1A3 114 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 F5H768 121 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 K7EQD1 137 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 RHOHQ15669 191 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
SNX12-205ENST00000490561 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 RNF185Q96GF1 192 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 PRADC1Q9BSG0 188 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
SNX12-205ENST00000490561 HHLA3Q9XRX5 114 aa9.35□□□□□ -0.91
SNX12-205ENST00000490561 HTN3P15516 51 aa9.34□□□□□ -0.91
SNX12-205ENST00000490561 CKS2P33552 79 aa9.34□□□□□ -0.91
SNX12-205ENST00000490561 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
SNX12-205ENST00000490561 ORMDL3Q8N138 153 aa9.34□□□□□ -0.91
SNX12-205ENST00000490561 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
SNX12-205ENST00000490561 LAMTOR2Q9Y2Q5 125 aa9.34□□□□□ -0.91
SNX12-205ENST00000490561 DEFB131BA0A096LNP1 70 aa9.33□□□□□ -0.92
SNX12-205ENST00000490561 H3BNG1 76 aa9.33□□□□□ -0.92
SNX12-205ENST00000490561 M0QY20 66 aa9.33□□□□□ -0.92
SNX12-205ENST00000490561 PHOX2AO14813 284 aa9.33□□□□□ -0.92
SNX12-205ENST00000490561 HOXA5P20719 270 aa9.33□□□□□ -0.92
SNX12-205ENST00000490561 CRYBA4P53673 196 aa9.33□□□□□ -0.92
SNX12-205ENST00000490561 FABP9Q0Z7S8 132 aa9.33□□□□□ -0.92
SNX12-205ENST00000490561 PAX4O43316 350 aa9.32□□□□□ -0.92
SNX12-205ENST00000490561 SLC25A29Q8N8R3 303 aa9.32□□□□□ -0.92
SNX12-205ENST00000490561 NIT2Q9NQR4 276 aa9.32□□□□□ -0.92
SNX12-205ENST00000490561 D6R8Y8 96 aa9.31□□□□□ -0.92
SNX12-205ENST00000490561 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
SNX12-205ENST00000490561 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
SNX12-205ENST00000490561 SH2D6Q7Z4S9 175 aa9.31□□□□□ -0.92
SNX12-205ENST00000490561 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.31□□□□□ -0.92
SNX12-205ENST00000490561 PHLDA1Q8WV24 401 aaPredicted RBP9.31□□□□□ -0.92
SNX12-205ENST00000490561 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
SNX12-205ENST00000490561 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
SNX12-205ENST00000490561 TRAV26-1A0A087WT03 109 aa9.3□□□□□ -0.92
SNX12-205ENST00000490561 TRAV26-2A0A0B4J265 109 aa9.3□□□□□ -0.92
SNX12-205ENST00000490561 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
SNX12-205ENST00000490561 NUPR2A6NF83 97 aa9.3□□□□□ -0.92
SNX12-205ENST00000490561 Q6ZSN1 163 aa9.3□□□□□ -0.92
SNX12-205ENST00000490561 C20orf78Q9BR46 151 aa9.3□□□□□ -0.92
SNX12-205ENST00000490561 TNFRSF18Q9Y5U5 241 aa9.3□□□□□ -0.92
SNX12-205ENST00000490561 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
SNX12-205ENST00000490561 TRBV7-3A0A075B6L6 115 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms